Index of /~birch/birchhomedir/admin/launchers/biolegato.app/Contents/Resources/bin-linux-x86_64

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]spades-core2025-05-06 09:31 91M 
[ ]spades-gmapper2025-05-06 09:31 58M 
[ ]binspreader2025-05-06 09:31 51M 
[ ]spades-gbuilder2025-05-06 09:31 43M 
[ ]magicblast2019-08-20 18:00 41M 
[ ]spades-read-filter2025-05-06 09:31 41M 
[ ]spaligner2025-05-06 09:31 40M 
[ ]spades-ionhammer2025-05-06 09:30 39M 
[ ]spades-kmer-estimating2025-05-06 09:31 39M 
[ ]spades-kmercount2025-05-06 09:31 38M 
[ ]cufflinks2014-05-05 21:29 36M 
[ ]tblastn_vdb2024-06-25 08:37 36M 
[ ]blastn_vdb2024-06-25 08:37 36M 
[ ]blast_formatter_vdb2024-06-25 08:38 36M 
[ ]spades-corrector-core2025-05-06 09:31 36M 
[ ]spades-convert-bin-to-fasta2025-05-06 09:31 35M 
[ ]cuffdiff2014-05-05 21:29 33M 
[ ]cuffnorm2014-05-05 21:29 32M 
[ ]rpstblastn2024-06-25 08:37 31M 
[ ]deltablast2024-06-25 08:37 31M 
[ ]rpsblast2024-06-25 08:37 31M 
[ ]tblastn2024-06-25 08:37 31M 
[ ]blastx2024-06-25 08:37 31M 
[ ]blastn2024-06-25 08:37 31M 
[ ]blastp2024-06-25 08:37 31M 
[ ]psiblast2024-06-25 08:37 31M 
[ ]tblastx2024-06-25 08:37 31M 
[ ]blast_formatter2024-06-25 08:37 31M 
[ ]cuffquant2014-05-05 21:29 30M 
[ ]bowtie2-align-s-debug2019-04-16 21:54 28M 
[ ]bowtie2-align-l-debug2019-04-16 21:54 28M 
[ ]gtf_to_sam2014-05-05 21:29 28M 
[ ]blastdbcmd2024-06-25 08:37 27M 
[ ]blast_vdb_cmd2024-06-25 08:38 24M 
[ ]windowmasker2024-06-25 08:37 24M 
[ ]makeblastdb2024-06-25 08:37 22M 
[ ]makeprofiledb2024-06-25 08:37 22M 
[ ]bowtie2-align-s2019-04-16 21:52 21M 
[ ]bowtie2-align-l2019-04-16 21:52 21M 
[ ]convert2blastmask2024-06-25 08:37 20M 
[ ]blastdbcheck2024-06-25 08:37 20M 
[ ]makembindex2024-06-25 08:37 20M 
[ ]segmasker2024-06-25 08:37 20M 
[ ]blastdb_aliastool2024-06-25 08:37 19M 
[ ]dustmasker2024-06-25 08:37 19M 
[ ]pathracer-seq-fs2025-05-06 09:32 18M 
[ ]pathracer2025-05-06 09:32 18M 
[ ]seqkit2023-03-17 04:00 17M 
[ ]spades-gsimplifier2025-05-06 09:32 16M 
[ ]tbl2asn.bin2020-03-01 14:57 15M 
[ ]tbl2asn2020-03-01 14:57 15M 
[ ]bowtie2-build-l-debug2019-04-16 21:52 15M 
[ ]bowtie2-build-s-debug2019-04-16 21:52 15M 
[ ]bowtie2-build-s2019-04-16 21:51 12M 
[ ]bowtie2-build-l2019-04-16 21:51 12M 
[ ]bowtie2-inspect-s2019-04-16 21:51 12M 
[ ]bowtie2-inspect-l2019-04-16 21:51 12M 
[ ]bowtie2-inspect-s-debug2019-04-16 21:52 12M 
[ ]bowtie2-inspect-l-debug2019-04-16 21:52 12M 
[ ]spades-gfa-split2025-05-06 09:31 12M 
[ ]snap-aligner2016-06-06 08:37 10M 
[ ]xace2003-07-01 10:39 9.6M 
[ ]spades-hammer2025-05-06 09:31 8.6M 
[ ]cutadapt2022-05-10 17:14 8.1M 
[ ]jellyfish.2.2.102019-03-10 14:47 8.0M 
[ ]samtools2023-07-11 12:23 6.9M 
[ ]samtools.1.122021-05-24 13:22 6.4M 
[ ]giface2003-07-01 10:39 5.9M 
[ ]bam-read2016-06-06 08:37 5.4M 
[ ]bl2seq2007-03-25 09:27 5.0M 
[ ]megablast2007-03-25 09:27 4.8M 
[ ]clustalo-1.2.4-Ubuntu-x86_642020-06-08 11:20 4.7M 
[ ]clustalo2020-06-08 11:20 4.7M 
[ ]xtract2020-07-15 16:20 4.5M 
[ ]stringtie2018-03-06 10:30 4.5M 
[ ]copymat2007-03-25 09:27 4.4M 
[ ]formatrpsdb2007-03-25 09:27 4.4M 
[ ]blastpgp2007-03-25 09:27 4.4M 
[ ]seedtop2007-03-25 09:27 4.2M 
[ ]blastclust2007-03-25 09:27 4.2M 
[ ]impala2007-03-25 09:27 4.2M 
[ ]formatdb2007-03-25 09:27 4.2M 
[ ]makemat2007-03-25 09:27 4.2M 
[ ]fastacmd2007-03-25 09:27 4.2M 
[ ]spades-truseq-scfcorrection2022-02-01 05:18 3.7M 
[ ]jellyfish.2.3.02023-07-07 14:30 3.6M 
[ ]jellyfish2023-07-07 14:30 3.6M 
[ ]scaffold_correction2017-09-27 19:33 3.4M 
[ ]abyss-paired-dbg2019-05-16 16:41 3.2M 
[ ]abyss-scaffold2019-05-16 16:41 3.2M 
[ ]PathConsensus2019-05-16 16:41 3.1M 
[ ]ABYSS2019-05-16 16:40 3.1M 
[ ]MergeContigs2019-05-16 16:41 2.9M 
[ ]MergePaths2019-05-16 16:41 2.8M 
[ ]ionhammer2017-09-27 19:33 2.7M 
[ ]konnector2019-05-16 16:40 2.6M 
[ ]abyss-sealer2019-05-16 16:41 2.5M 
[ ]PopBubbles2019-05-16 16:41 2.5M 
[ ]asn2gb2004-11-09 08:55 2.5M 
[ ]Bandage2016-12-15 20:07 2.5M 
[ ]AdjList2019-05-16 16:41 2.4M 
[ ]SimpleGraph2019-05-16 16:41 2.4M 
[ ]abyss-bloom-dbg2019-05-16 16:40 2.4M 
[ ]cuffcompare2014-05-05 21:29 2.4M 
[ ]tace2003-07-01 10:39 2.4M 
[ ]hammer2017-09-27 19:33 2.2M 
[ ]corrector2017-09-27 19:33 2.2M 
[ ]abyss-bloom2019-05-16 16:40 2.2M 
[ ]abyss-map-ssq2019-05-16 16:41 2.2M 
[ ]PathOverlap2019-05-16 16:41 2.2M 
[ ]abyss-map2019-05-16 16:41 2.1M 
[ ]DistanceEst-ssq2019-05-16 16:41 2.1M 
[ ]taql2003-07-01 10:39 2.1M 
[ ]abyss-overlap2019-05-16 16:41 2.1M 
[ ]Overlap2019-05-16 16:41 2.1M 
[ ]DistanceEst2019-05-16 16:41 2.0M 
[ ]abyss-filtergraph2019-05-16 16:41 2.0M 
[ ]tagcount2003-07-01 10:39 1.9M 
[ ]KAligner2019-05-16 16:41 1.9M 
[ ]getob2024-06-16 14:47 1.9M 
[ ]prot2nuc2023-05-22 13:07 1.8M 
[ ]ribosome2024-06-17 10:34 1.8M 
[ ]reform2023-05-22 13:07 1.8M 
[ ]splitdb2024-06-17 17:01 1.8M 
[ ]getloc2023-05-22 13:07 1.8M 
[ ]xylem_shuffle2023-05-22 13:07 1.8M 
[ ]SOAPdenovo-Trans-127mer_v1.042019-04-08 12:05 1.8M 
[ ]SOAPdenovo-Trans-127mer2019-04-08 12:05 1.8M 
[ ]gffread2014-05-05 21:29 1.7M 
[ ]abyss-fixmate-ssq2019-05-16 16:41 1.7M 
[ ]abyss-fixmate2019-05-16 16:41 1.7M 
[ ]abyss-todot2019-05-16 16:40 1.6M 
[ ]SOAPdenovo-Trans-31mer_v1.042019-04-08 12:04 1.6M 
[ ]SOAPdenovo-Trans-31mer2019-04-08 12:04 1.6M 
[ ]abyss-layout2019-05-16 16:41 1.6M 
[ ]libXm.so.2.0.12007-06-07 20:06 1.5M 
[ ]libXm.so.22007-06-07 20:06 1.5M 
[ ]lastal2023-11-12 17:55 1.4M 
[ ]abyss-gapfill2019-05-16 16:41 1.2M 
[ ]bachrest2025-03-05 14:48 1.1M 
[ ]bachrest.old2023-09-26 11:56 1.1M 
[ ]numseq2025-03-05 14:48 1.1M 
[ ]testcode2025-03-05 14:48 1.1M 
[ ]giganumseq2025-03-05 14:48 1.1M 
[ ]d3hom2025-03-05 14:48 1.1M 
[ ]d4hom2025-03-05 14:48 1.1M 
[ ]p2hom2025-03-05 14:48 1.1M 
[ ]p1hom2025-03-05 14:48 1.1M 
[ ]abyss-junction2019-05-16 16:41 1.1M 
[ ]multidigest2025-03-05 14:48 1.1M 
[ ]gel2025-03-05 14:48 1.1M 
[ ]funnel2025-03-05 14:48 1.1M 
[ ]abyss-align2019-05-16 16:40 1.1M 
[ ]mb.bin2007-06-07 18:05 1.1M 
[ ]DAssembler2019-05-16 16:41 1.0M 
[ ]ParseAligns2019-05-16 16:41 1.0M 
[ ]dotter2016-09-21 18:08 1.0M 
[ ]SOAPdenovo-127mer_v2.04-r2412019-04-05 17:01 1.0M 
[ ]SOAPdenovo-127mer2019-04-05 17:01 1.0M 
[ ]abyss-db-csv2019-05-16 16:40 958K 
[ ]abyss-gc2019-05-16 16:40 945K 
[ ]primer3_core2023-06-06 09:06 940K 
[ ]primer32023-06-06 09:06 940K 
[ ]abyss-mergepairs2019-05-16 16:40 931K 
[ ]abyss-longseqdist2019-05-16 16:41 919K 
[ ]abyss-fac2019-05-16 16:40 911K 
[ ]abyss-index2019-05-16 16:41 868K 
[ ]Consensus2019-05-16 16:41 837K 
[ ]SOAPdenovo-63mer_v2.04-r2412019-04-05 17:01 817K 
[ ]SOAPdenovo-63mer2019-04-05 17:01 817K 
[ ]spades-bwa2025-05-06 09:27 796K 
[ ]zsh2018-06-13 09:33 787K 
[ ]lalign362023-05-23 09:57 783K 
[ ]lalign32023-05-23 09:57 783K 
[ ]lalign2023-05-23 09:57 783K 
[ ]acediff2003-07-01 10:39 762K 
[ ]logcounter2019-05-16 16:41 740K 
[ ]sqlitestudiocli2025-02-23 15:53 726K 
[ ]glsearch362023-05-23 09:58 707K 
[ ]glsearch32023-05-23 09:58 707K 
[ ]ggsearch362023-05-23 09:58 703K 
[ ]ggsearch32023-05-23 09:58 703K 
[ ]gffcompare2018-02-15 13:24 698K 
[ ]abyss-tofastq2019-05-16 16:40 654K 
[ ]tfastm362023-05-23 09:58 605K 
[ ]tfastm32023-05-23 09:58 605K 
[ ]tfasty362023-05-23 09:58 603K 
[ ]tfasty32023-05-23 09:58 603K 
[ ]fasty362023-05-23 09:57 602K 
[ ]fasty32023-05-23 09:57 602K 
[ ]tfastx362023-05-23 09:57 593K 
[ ]tfastx32023-05-23 09:57 593K 
[ ]fastx362023-05-23 09:57 591K 
[ ]fastx32023-05-23 09:57 591K 
[ ]tfasts362023-05-23 09:58 581K 
[ ]tfasts32023-05-23 09:58 581K 
[ ]tfastf362023-05-23 09:58 574K 
[ ]tfastf32023-05-23 09:58 574K 
[ ]fasts362023-05-23 09:57 566K 
[ ]fasts32023-05-23 09:57 566K 
[ ]fastm362023-05-23 09:58 565K 
[ ]fastm32023-05-23 09:58 565K 
[ ]ssearch362023-05-23 09:57 565K 
[ ]ssearch32023-05-23 09:57 565K 
[ ]ssearch2023-05-23 09:57 565K 
[ ]fastf362023-05-23 09:58 558K 
[ ]fastf32023-05-23 09:58 558K 
[ ]fasta362023-05-23 09:57 468K 
[ ]fasta32023-05-23 09:57 468K 
[ ]fasta2023-05-23 09:57 468K 
[ ]velvetg2016-06-15 15:13 384K 
[ ]lastdb2023-11-12 17:54 352K 
[ ]SOAPdenovo-fusion_v2.04-r2412019-04-05 17:01 286K 
[ ]SOAPdenovo-fusion2019-04-05 17:01 286K 
[ ]last-split2023-11-12 17:55 255K 
[ ]treetool.bin2002-01-11 05:34 241K 
[ ]promlk2012-03-11 17:11 229K 
[ ]proml2012-03-11 17:11 219K 
[ ]restml2012-03-11 17:11 209K 
[ ]dnamlk2012-03-11 17:11 209K 
[ ]letos2026-08-11 18:54 207K 
[ ]dnaml2012-03-11 17:11 205K 
[ ]dnamove2012-03-11 17:11 201K 
[ ]protdist2012-03-11 17:11 193K 
[ ]protpars2012-03-11 17:11 191K 
[ ]drawtree2012-03-11 17:11 190K 
[ ]dnapars2012-03-11 17:11 184K 
[ ]velveth2016-06-15 15:13 180K 
[ ]seqboot2012-03-11 17:11 180K 
[ ]dnadist2012-03-11 17:11 178K 
[ ]dnacomp2012-03-11 17:11 175K 
[ ]drawgram2012-03-11 17:11 173K 
[ ]pars2012-03-11 17:11 170K 
[ ]lfasta2008-04-01 13:04 168K 
[ ]dnapenny2012-03-11 17:11 167K 
[ ]dnainvar2012-03-11 17:11 166K 
[ ]restdist2012-03-11 17:11 165K 
[ ]cd-hit-4542020-06-15 18:12 165K 
[ ]cd-hit-est-2d2020-06-15 18:12 165K 
[ ]cd-hit-2d2020-06-15 18:12 165K 
[ ]cd-hit-est2020-06-15 18:12 165K 
[ ]cd-hit-div2020-06-15 18:12 165K 
[ ]cd-hit2020-06-15 18:12 161K 
[ ]dialign-tx2009-02-18 18:53 155K 
[ ]ntthal2010-03-23 16:07 146K 
[ ]retree2012-03-11 17:11 144K 
[ ]unpigz2018-02-01 11:20 142K 
[ ]pigz2018-02-01 11:20 142K 
[ ]move2012-03-11 17:11 138K 
[ ]libUil.so.2.0.12007-06-07 20:06 130K 
[ ]libUil.so.22007-06-07 20:06 130K 
[ ]dolmove2012-03-11 17:11 126K 
[ ]mix2012-03-11 17:11 124K 
[ ]prdf2008-04-01 13:04 122K 
[ ]penny2012-03-11 17:11 116K 
[ ]dollop2012-03-11 17:11 116K 
[ ]contml2012-03-11 17:11 112K 
[ ]gmon.out2021-09-20 11:19 112K 
[ ]treedist2012-03-11 17:11 112K 
[ ]clique2012-03-11 17:11 112K 
[ ]fitch2012-03-11 17:11 111K 
[ ]dolpenny2012-03-11 17:11 107K 
[ ]libMrm.so.2.0.12007-06-07 20:06 106K 
[ ]libMrm.so.22007-06-07 20:06 106K 
[ ]kitsch2012-03-11 17:11 104K 
[ ]consense2012-03-11 17:11 103K 
[ ]PrintStrat2003-02-20 12:40 101K 
[ ]align02008-04-01 13:04 100K 
[ ]MakeCons2003-02-20 12:39 100K 
[ ]align2008-04-01 13:04 98K 
[ ]heapsortHGL2003-02-20 12:39 98K 
[ ]last-pair-probs2023-11-12 17:55 97K 
[ ]Consto01mask2003-02-20 12:40 97K 
[ ]contrast2012-03-11 17:11 92K 
[ ]neighbor2012-03-11 17:11 91K 
[ ]rcorrector2023-12-05 13:38 88K 
[ ]cd-hit-dup2020-06-15 18:13 86K 
[ ]factor2012-03-11 17:11 81K 
[ ]plfasta2002-11-08 17:17 80K 
[ ]gendist2012-03-11 17:11 77K 
[ ]plalign2002-11-08 17:17 72K 
[ ]Gblocks2011-04-29 15:58 69K 
[ ]flalign2002-11-08 17:17 69K 
[ ]ntdpal2023-06-06 09:06 65K 
[ ]weighbor2007-06-07 18:02 62K 
[ ]pollux2018-01-25 17:47 61K 
[ ]garnier2008-04-01 13:04 60K 
[ ]cd-hit-lap2020-06-15 18:13 55K 
[TXT]legacy_blast.pl2020-05-26 10:41 50K 
[ ]grease2008-04-01 13:04 50K 
[ ]oligotm2023-06-06 09:06 44K 
[ ]relate2002-11-08 17:17 44K 
[ ]psgrease2002-11-08 17:17 42K 
[ ]tgrease2002-11-08 17:17 41K 
[ ]LoopTool2002-01-21 03:06 40K 
[ ]lsadt2002-01-21 03:06 39K 
[ ]bestscor2002-11-08 17:17 39K 
[ ]lalign2list2004-05-15 19:45 38K 
[ ]long_seq_tm_test2023-06-06 09:06 38K 
[ ]lav2ps2010-03-11 13:27 37K 
[TXT]update_blastdb.pl2024-04-17 08:16 36K 
[TXT]spades.py2025-05-06 09:25 35K 
[TXT]rnaviralspades.py2025-05-06 09:25 35K 
[TXT]rnaspades.py2025-05-06 09:25 35K 
[TXT]plasmidspades.py2025-05-06 09:25 35K 
[TXT]metaviralspades.py2025-05-06 09:25 35K 
[TXT]metaspades.py2025-05-06 09:25 35K 
[TXT]metaplasmidspades.py2025-05-06 09:25 35K 
[TXT]coronaspades.py2025-05-06 09:25 35K 
[ ]digest2001-08-14 20:06 35K 
[ ]map_db2023-05-23 09:58 35K 
[ ]lav2svg2008-10-24 11:51 35K 
[ ]update_blastdb.pl.old2023-02-23 09:35 33K 
[ ]CAP22002-01-21 03:06 33K 
[ ]libDtPrint.so.1.0.02007-06-07 20:06 32K 
[ ]libDtPrint.so.12007-06-07 20:06 32K 
[ ]shuffle2007-06-03 21:15 29K 
[ ]last-merge-batches2023-11-12 17:55 23K 
[ ]abyss-pe2023-11-20 19:28 22K 
[ ]count2002-01-21 03:06 20K 
[ ]newlinks.tar2014-10-08 13:30 20K 
[ ]bowtie22019-04-16 21:50 19K 
[ ]cuffmerge2014-05-05 21:29 19K 
[ ]Restriction2002-01-21 03:06 19K 
[ ]findall2002-01-21 03:06 18K 
[ ]hisat22017-06-07 14:49 18K 
[ ]fastq_pair2019-03-12 09:08 17K 
[ ]sho_helix2002-01-21 03:06 17K 
[ ]varpos2002-01-21 03:06 17K 
[ ]font32012-03-11 17:11 17K 
[ ]fromgb2002-11-08 17:17 17K 
[ ]font52012-03-11 17:11 16K 
[ ]Zuk_to_gen2002-01-21 03:06 15K 
[ ]extract_from_pdb2001-07-11 16:40 14K 
[ ]font62012-03-11 17:11 14K 
[TXT]update_blastdb.pl.original2014-09-11 07:12 12K 
[ ]font42012-03-11 17:11 11K 
[ ]font22012-03-11 17:11 11K 
[TXT]run_rcorrector.pl2017-04-14 21:33 7.1K 
[ ]abyss-bloom-dist.mk2019-05-16 16:40 6.3K 
[TXT]cleanup-blastdb-volumes.py2019-08-07 09:59 6.1K 
[ ]font12012-03-11 17:11 5.8K 
[TXT]get_species_taxids.sh2021-05-12 09:35 4.6K 
[ ]abyss-samtoafg2019-05-16 16:40 4.4K 
[ ]bowtie2-build2019-04-16 21:50 2.8K 
[ ]hisat2-build2016-03-12 11:25 2.7K 
[ ]bowtie2-inspect2019-04-16 21:50 2.7K 
[ ]abyss-dida2019-05-16 16:40 2.7K 
[TXT]newlinks1.txt2014-10-08 13:26 2.4K 
[ ]hisat2-inspect2016-03-12 11:25 2.3K 
[ ]abyss-fatoagp2019-05-16 16:40 2.0K 
[TXT]spades_init.py2025-05-06 09:25 1.7K 
[ ]abyss-bwamem2019-05-16 16:40 1.4K 
[ ]abyss-bwasw2019-05-16 16:40 1.3K 
[ ]abyss-bwa2019-05-16 16:40 1.2K 
[ ]abyss-bowtie22019-05-16 16:40 1.2K 
[ ]transrate2016-06-06 08:37 1.1K 
[ ]abyss-bowtie2019-05-16 16:40 1.1K 
[ ]mocca2001-07-11 16:40 708  
[ ]abyss-db-txt2019-05-16 16:40 703  
[ ]abyss-stack-size2019-05-16 16:40 671  
[ ]transformseq2020-02-01 14:55 392  
[ ]weblogo.old2020-02-01 16:00 382  
[TXT]newlinks2.txt2014-10-08 13:26 247  
[ ]ABYSS-P2019-05-16 16:40 232  
[ ]VERSIONS2002-11-08 19:36 225  
[ ]abyss-tabtomd2019-05-16 16:40 209  
[TXT]makelinks.sh2014-09-29 19:59 139  
[ ]fastfiles2014-09-29 19:58 129  
[ ]l42008-05-14 11:42 111  
[ ]abyss-kaligner2019-05-16 16:40 39  
[DIR]mafftdir/2022-07-24 14:08 -  
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