fasta35 oohu.aa FASTA searches a protein or DNA sequence data bank version 35.04 Feb. 20, 2010 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: OOHU, 348 aa 1>>>OOHU | 1358 rhodopsin - human - 348 aa - 348 aaoohu.pataa.fasta Library: GB203 Patented Protein 273040086 residues in 1456348 sequences opt E() < 20 140205 0:====================================================== 22 95 0:= one = represents 2633 library sequences 24 97 1:* 26 147 31:* 28 245 330:* 30 618 2002:* 32 1956 7741:= * 34 7486 20994:=== * 36 20839 43116:======== * 38 44469 71255:================= * 40 75977 99394:============================= * 42 111987 121497:=========================================== * 44 140172 134023:==================================================*=== 46 157947 136505:===================================================*======== 48 147689 130688:=================================================*======= 50 129330 119254:=============================================*==== 52 109194 104844:=======================================*== 54 83921 89555:================================ * 56 67965 74806:========================== * 58 50300 61414:==================== * 60 38347 49749:=============== * 62 29114 39884:============ * 64 22549 31720:========= * 66 17150 25070:======= * 68 13179 19720:====== * 70 10019 15453:==== * 72 7531 12075:=== * 74 5782 9415:===* 76 4207 7328:==* 78 3397 5696:==* 80 3006 4423:=* 82 1907 3383:=* 84 1463 2680:=* 86 1005 2074:* 88 869 1604:* inset = represents 64 library sequences 90 600 1241:* 92 471 961:* :======== * 94 412 743:* :======= * 96 301 575:* :===== * 98 221 445:* :==== * 100 208 344:* :==== * 102 165 266:* :=== * 104 106 206:* :== * 106 129 159:* :==* 108 80 123:* :=* 110 70 95:* :=* 112 83 74:* :=* 114 70 57:* :*= 116 51 44:* :* 118 59 34:* :* >120 3158 26:*= :*======================================= 273040086 residues in 1456348 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9267+/-0.000107; mu= 9.0311+/- 0.005 mean_var=54.3530+/- 9.078, 0's: 5749 Z-trim: 5984 B-trim: 0 in 0/63 Lambda= 0.173965 statistics sampled from 60000 to 1453210 sequences Kolmogorov-Smirnov statistic: 0.1047 (N=29) at 88 Algorithm: FASTA (3.5 Sept 2006) [optimized] Parameters: BL50 matrix (15:-5) ktup: 2 join: 43, opt: 31, open/ext: -10/-2, width: 16 The best scores are: opt bits E(1456348) gi|10059598|gb|AAE36276.1| Sequence 8 from patent ( 348) 2347 597.3 2.8e-169 gi|15113175|gb|AAE68759.1| Sequence 11 from patent ( 348) 2251 573.2 5.1e-162 gi|302914791|gb|ADL74427.1| Sequence 2 from patent ( 348) 2237 569.7 5.8e-161 gi|1608164|gb|AAB11119.1| Sequence 56 from patent ( 309) 1989 507.4 2.9e-142 gi|284897879|gb|ADC20571.1| Sequence 1055 from pat ( 348) 1085 280.5 6.3e-74 gi|284897876|gb|ADC20568.1| Sequence 1052 from pat ( 364) 1002 259.7 1.2e-67 gi|284897877|gb|ADC20569.1| Sequence 1053 from pat ( 364) 990 256.7 9.8e-67 gi|1608167|gb|AAB11122.1| Sequence 59 from patent ( 305) 958 248.6 2.2e-64 gi|1608165|gb|AAB11120.1| Sequence 57 from patent ( 297) 825 215.2 2.4e-54 gi|1608166|gb|AAB11121.1| Sequence 58 from patent ( 297) 805 210.2 7.8e-53 >>gi|10059598|gb|AAE36276.1| Sequence 8 from patent US 5 (348 aa) initn: 2347 init1: 2347 opt: 2347 Z-score: 3182.1 bits: 597.3 E(): 2.8e-169 Smith-Waterman score: 2347; 100.0% identity (100.0% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 10 20 30 40 50 60 70 80 90 100 110 120 OOHU VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 70 80 90 100 110 120 130 140 150 160 170 180 OOHU GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 130 140 150 160 170 180 190 200 210 220 230 240 OOHU EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 190 200 210 220 230 240 250 260 270 280 290 300 OOHU ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 250 260 270 280 290 300 310 320 330 340 OOHU YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::::::::::::::::::::::::::::::::::::::::::::::: gi|100 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 310 320 330 340 >>gi|15113175|gb|AAE68759.1| Sequence 11 from patent US (348 aa) initn: 2251 init1: 2251 opt: 2251 Z-score: 3051.9 bits: 573.2 E(): 5.1e-162 Smith-Waterman score: 2251; 93.7% identity (98.9% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 10 20 30 40 50 60 70 80 90 100 110 120 OOHU VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG :::::::::::::::::::::::::::.::::.::::::::::::::::::::::::::: gi|151 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 70 80 90 100 110 120 130 140 150 160 170 180 OOHU GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP ::::::::::::::::::.::::::::::::::::::.:::.::::::::::.::::::: gi|151 GEIALWSLVVLAIERYVVICKPMSNFRFGENHAIMGVVFTWIMALACAAPPLVGWSRYIP 130 140 150 160 170 180 190 200 210 220 230 240 OOHU EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES ::.:::::.::::::::::::::::::::::::::.:.:::::::::::::::::::::: gi|151 EGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIVIFFCYGQLVFTVKEAAAQQQES 190 200 210 220 230 240 250 260 270 280 290 300 OOHU ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::::::::::.::. ::::: :::.:::::::::::::: ::::.:::::::..: gi|151 ATTQKAEKEVTRMVILMVVFFLICWFPYAGVAFYIFTHQGSNFGFIFMTLPAFFAKSSSI 250 260 270 280 290 300 310 320 330 340 OOHU YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA ::::::::::::::::::::.::::: :::::::::.::::::::::: gi|151 YNPVIYIMMNKQFRNCMLTTLCCGKNILGDDEASATASKTETSQVAPA 310 320 330 340 >>gi|302914791|gb|ADL74427.1| Sequence 2 from patent US (348 aa) initn: 2237 init1: 2237 opt: 2237 Z-score: 3032.9 bits: 569.7 E(): 5.8e-161 Smith-Waterman score: 2237; 93.4% identity (98.6% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY ::::::::::::::: ::::::::: ::::::::::::::::::::::.::::::::::: gi|302 MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLY 10 20 30 40 50 60 70 80 90 100 110 120 OOHU VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG :::::::::::::::::::::::::::.::::.::::::::::::::::::::::::::: gi|302 VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG 70 80 90 100 110 120 130 140 150 160 170 180 OOHU GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|302 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP 130 140 150 160 170 180 190 200 210 220 230 240 OOHU EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES ::.:::::::::: . :.:::::::::::::: ::.:.:::::::::::::::::::::: gi|302 EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES 190 200 210 220 230 240 250 260 270 280 290 300 OOHU ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::::::::::::::::::::.:::.:::::::::::.::::::::::::::..:. gi|302 ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAV 250 260 270 280 290 300 310 320 330 340 OOHU YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::::::::::::::::.::.:::::::::::::.::::::::::::: gi|302 YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA 310 320 330 340 >>gi|1608164|gb|AAB11119.1| Sequence 56 from patent US 5 (309 aa) initn: 1405 init1: 830 opt: 1989 Z-score: 2697.3 bits: 507.4 E(): 2.9e-142 Smith-Waterman score: 1989; 96.1% identity (97.7% similar) in 311 aa overlap (38-348:1-309) 10 20 30 40 50 60 OOHU NFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKK :::::::::::::::::::::::::::::: gi|160 SMLAAYMFLLIVLGFPINFLTLYVTVQHKK 10 20 30 70 80 90 100 110 120 OOHU LRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWS ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LRTPINYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWS 40 50 60 70 80 90 130 140 150 160 170 180 OOHU LVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSC : :::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|160 LW-LAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPIAGWSRYIPEGLQCSC 100 110 120 130 140 190 200 210 220 230 240 OOHU GIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAE ::::::::::::::::::::::::::::.:: :::::::::::::::::::::::::::: gi|160 GIDYYTLKPEVNNESFVIYMFVVHFTIPLII-FFCYGQLVFTVKEAAAQQQESATTQKAE 150 160 170 180 190 200 250 260 270 280 290 300 OOHU KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYI ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|160 KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMRIPAFFAKSAAIYNPVIYI 210 220 230 240 250 260 310 320 330 340 OOHU MMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA ..::::::::: ::::::::::::::::::: :::::::: gi|160 IFNKQFRNCMLQLICCGKNPLGDDEASATVSKRETSQVAPA 270 280 290 300 >>gi|284897879|gb|ADC20571.1| Sequence 1055 from patent (348 aa) initn: 1038 init1: 1038 opt: 1085 Z-score: 1470.3 bits: 280.5 E(): 6.3e-74 Smith-Waterman score: 1085; 45.9% identity (77.5% similar) in 338 aa overlap (9-346:9-341) 10 20 30 40 50 60 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY ::. :.: ..: .:.. :::..: : : . ::.: ....:::.: ..: gi|284 MRKMSEEEFYL-FKNISSV--GPWDGPQYHIAPVWAFYLQAAFMGTVFLIGFPLNAMVLV 10 20 30 40 50 70 80 90 100 110 120 OOHU VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG .:...:::: ::::::.:.. . ... . . .. .: .:::::: : ::::..:.. gi|284 ATLRYKKLRQPLNYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVA 60 70 80 90 100 110 130 140 150 160 170 180 OOHU GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP : .. :::. ::.:::.:.:::..::::. .::. : ::..... . ::. ::::.:: gi|284 GLVTGWSLAFLAFERYIVICKPFGNFRFSSKHALTVVLATWTIGIGVSIPPFFGWSRFIP 120 130 140 150 160 170 190 200 210 220 230 240 OOHU EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES :::::::: :.::. . .::.. ..:. : .:. .: : : ::. ..: .::::::: gi|284 EGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQES 180 190 200 210 220 230 250 260 270 280 290 300 OOHU ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI :::::::.::.:::..:: .: .:.::::. :.:. .... .. ..:::.::.::: : gi|284 ATTQKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSACI 240 250 260 270 280 290 310 320 330 340 OOHU YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::.:: .:::::. :.. .: :: . :. . . .:::.: :. gi|284 YNPIIYCFMNKQFQACIMKMVC-GKA-MTDESDTCSSQKTEVSTVSSTQVGPN 300 310 320 330 340 >>gi|284897876|gb|ADC20568.1| Sequence 1052 from patent (364 aa) initn: 977 init1: 977 opt: 1002 Z-score: 1357.5 bits: 259.7 E(): 1.2e-67 Smith-Waterman score: 1002; 44.3% identity (74.2% similar) in 345 aa overlap (2-346:21-359) 10 20 30 40 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLA ..:.. : ::.: :.::: :.:..: : . . . gi|284 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTS 10 20 30 40 50 50 60 70 80 90 100 OOHU AYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHG ..:..... . : :.: .:.. :::: :::.::.::::::: .. . : .. ....: gi|284 VWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYG 60 70 80 90 100 110 110 120 130 140 150 160 OOHU YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTW :::.: : :::. ..: : .::::.... ::..:::::..: :: . ::.:.::.: gi|284 YFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSW 120 130 140 150 160 170 170 180 190 200 210 220 OOHU VMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFF . : . .:::. ::::: :.::. ::: : .. . . .:..: ..:. :. :: . gi|284 IWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVL 180 190 200 210 220 230 230 240 250 260 270 280 OOHU CYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGS :: :. .... .: ::.:: .::::::::::::..::.:: .:: ::: : . .. : gi|284 CYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGY 240 250 260 270 280 290 290 300 310 320 330 340 OOHU NFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTE : :.. ..::::::::.:::::::..::.:::::.: . ::. . : ...:::: gi|284 PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTE 300 310 320 330 340 350 OOHU TSQVAPA .:.:. gi|284 VSSVSSVSPA 360 >>gi|284897877|gb|ADC20569.1| Sequence 1053 from patent (364 aa) initn: 965 init1: 965 opt: 990 Z-score: 1341.2 bits: 256.7 E(): 9.8e-67 Smith-Waterman score: 990; 43.2% identity (74.5% similar) in 345 aa overlap (2-346:21-359) 10 20 30 40 OOHU MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLA ..:.. : ::.: :.::: :.:..: : . . . gi|284 MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTS 10 20 30 40 50 50 60 70 80 90 100 OOHU AYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHG ..:..... . : :.: .:.. :::: :::.::.::::::: .. . : .. ... : gi|284 VWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSG 60 70 80 90 100 110 110 120 130 140 150 160 OOHU YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTW :::.: : :::. ..: : .::::.... ::..:::::..: :: . ::.:.::.: gi|284 YFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSW 120 130 140 150 160 170 170 180 190 200 210 220 OOHU VMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFF . . . .:::. ::::: :.::. ::: : .. . . .:..: ..:. ::. ::.. gi|284 IWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIML 180 190 200 210 220 230 230 240 250 260 270 280 OOHU CYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGS :: :. .... .: ::.:: .::::::::::::..:..:. .:: ::. : . .. : gi|284 CYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGY 240 250 260 270 280 290 290 300 310 320 330 340 OOHU NFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTE : :.. ..::.:::::.:::::::..::.:::::.: . ::. . : ...:::: gi|284 AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTE 300 310 320 330 340 350 OOHU TSQVAPA .:.:. gi|284 VSSVSSVSPA 360 >>gi|1608167|gb|AAB11122.1| Sequence 59 from patent US 5 (305 aa) initn: 894 init1: 857 opt: 958 Z-score: 1299.0 bits: 248.6 E(): 2.2e-64 Smith-Waterman score: 958; 45.5% identity (75.5% similar) in 310 aa overlap (41-347:2-304) 20 30 40 50 60 70 OOHU VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT ::.: ....:::. : .:. .:::: gi|160 QAAFMGTVFLIGFPL----LVATLAYKKLRQ 10 20 80 90 100 110 120 130 OOHU PLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV : ::::.:.. . ... . . .. .: .:::::: : ::::..:..: .. :::. gi|160 P-NYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVAGLVTGWSLAF 30 40 50 60 70 80 140 150 160 170 180 190 OOHU LAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGID ::.:::.:.:::..::::. .::. : ::..... . ::. ::::.:::::::::: : gi|160 LAFERYIVICKPFGNFRFSSKHALTVVIATWTIGIGVSIPPFFGWSRFIPEGLQCSCGPD 90 100 110 120 130 140 200 210 220 230 240 250 OOHU YYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEV ::. . .::.. ..:. : .:. .: : : ::. ..: .::::::::::::::.:: gi|160 KYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESATTQKAEREV 150 160 170 180 190 200 260 270 280 290 300 310 OOHU TRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMN .:::..:: .: .:.::::. :.:. .... .. .. ::.::.::: ::::.:: .:: gi|160 SRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVRIPSFFSKSACIYNPIIYCFMN 210 220 230 240 250 260 320 330 340 OOHU KQFRNCMLTTICCGKNPLGDDEASAT---VSKTETSQVAPA :::. :.. . ::: . .: :. :: . ..::.: gi|160 KQFQACIM--MVCGKAMMESDTCSSQKTEVSTVSSTQVGPN 270 280 290 300 >>gi|1608165|gb|AAB11120.1| Sequence 57 from patent US 5 (297 aa) initn: 735 init1: 446 opt: 825 Z-score: 1118.7 bits: 215.2 E(): 2.4e-54 Smith-Waterman score: 843; 44.2% identity (72.6% similar) in 303 aa overlap (44-346:1-292) 20 30 40 50 60 70 OOHU SNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLN :..... . : :.: .:.. ::: :.: gi|160 MIFVVIASVFTNGLVLAATMKFKKLPHPIN 10 20 30 80 90 100 110 120 130 OOHU YILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAI .::.::::::. .. . : .. ....::::.: : :::. ..: : .::::.... gi|160 WILVNLAVADIAGTVIASTISVVNQVYGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISW 40 50 60 70 80 90 140 150 160 170 180 190 OOHU ERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYT ::..:::::..: :: . ::.:.::.:. : . .:::. ::::: :.::. ::: : .. gi|160 ERWMVVCKPFGNVRFDAKIAIVGIAFSWIWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFS 100 110 120 130 140 150 200 210 220 230 240 250 OOHU LKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRM . . .:.. :. :: .:: :. ... .: ::.:: .::::::::::: gi|160 GSSYPGVQSLLCI-------TPLSIIVLCYLQVWTAIRAVAKQQKESESTQKAEKEVTRM 160 170 180 190 200 260 270 280 290 300 310 OOHU VIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQF . ::.:: .:: ::: : . .. : : :.. ..::::::::.:::::::..::.:: gi|160 WV-MVLAFCFCWGPYAFFACFAAANPGYPFHPLMAALPAFFAKSATIYNPVIYVFMNRQF 210 220 230 240 250 260 320 330 340 OOHU RNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA :::.: . ::. . : ...::::.:.:. gi|160 RNCILQLF--GKK-VDDGSELSSASKTEVSSVSSVSPA 270 280 290 >>gi|1608166|gb|AAB11121.1| Sequence 58 from patent US 5 (297 aa) initn: 674 init1: 256 opt: 805 Z-score: 1091.6 bits: 210.2 E(): 7.8e-53 Smith-Waterman score: 805; 44.5% identity (73.6% similar) in 292 aa overlap (55-346:12-292) 30 40 50 60 70 80 OOHU EYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADL : :.: .:.. :::: :::.::.:.::::. gi|160 RCFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNIAVADI 10 20 30 40 90 100 110 120 130 140 OOHU FMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS .. . : .. ... ::::.: : :::. ..: : .::::.... ::.. :::.. gi|160 AGTVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLW-CKPFG 50 60 70 80 90 100 150 160 170 180 190 200 OOHU NFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFV : :: . ::.:.::.:. . . .:::. ::::: :.::. ::: : .. . . .:.: gi|160 NVRFDAKIAIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSLV 110 120 130 140 150 160 210 220 230 240 250 260 OOHU IYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIC :. :. ::. ::. :: :. .... .: ::.:: .:::::::::::. .:. .: gi|160 IM--VTCCIIPIAIIL-CYLQVWLAIRAVAKQQKESESTQKAEKEVTRML----FAYCVC 170 180 190 200 210 270 280 290 300 310 320 OOHU WVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCG : ::. : . .. : : :.. ..::.:::::.:::::::..::.:::::.: . : gi|160 WGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF--G 220 230 240 250 260 270 330 340 OOHU KNPLGDDEASATVSKTETSQVAPA :. . : ...::::.:.:. gi|160 KK-VDDGSELSSASKTEVSSVSSVSPA 280 290 348 residues in 1 query sequences 273040086 residues in 1456348 library sequences Scomplib [35.04] start: Sun Sep 28 18:09:59 2014 done: Sun Sep 28 18:11:34 2014 Total Scan time: 33.400 Total Display time: 0.040 Function used was FASTA [version 35.04 Feb. 20, 2010]