LOCUS       NC_063443               5235 bp    DNA     linear   CON 23-JUN-2022
DEFINITION  Brassica napus cultivar Da-Ae chromosome A10, Da-Ae, whole genome
            shotgun sequence.
ACCESSION   NC_063443 REGION: 16542422..16547656
VERSION     NC_063443.1
DBLINK      BioProject: PRJNA844685
            BioSample: SAMN14670173
            Assembly: GCF_020379485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brassica napus (rape)
  ORGANISM  Brassica napus
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Brassiceae; Brassica.
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CM035455.1.
            Assembly name: Da-Ae
            The genomic sequence for this RefSeq record is from the
            whole-genome assembly released by the None on 2021/10/08. The
            original whole-genome shotgun project has the accession
            JAGKQM000000000.1.
            
            ##Genome-Assembly-Data-START##
            Assembly Provider      :: None
            Assembly Date          :: 26-JUN-2019
            Assembly Method        :: Canu v. 1.6; Pilon v. 1.22; HiRise v.
                                      FEB-2018
            Assembly Name          :: Da-Ae
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: PacBio Sequel; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Brassica napus Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5235
                     /organism="Brassica napus"
                     /mol_type="genomic DNA"
                     /cultivar="Da-Ae"
                     /db_xref="taxon:3708"
                     /chromosome="A10"
                     /tissue_type="Seedling"
                     /dev_stage="Seedling"
                     /country="USA"
     gene            complement(676..3662)
                     /gene="LOC111211017"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:111211017"
     mRNA            complement(join(676..959,1056..3662))
                     /gene="LOC111211017"
                     /product="receptor-like protein 33"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /transcript_id="XM_048742387.1"
                     /db_xref="GeneID:111211017"
     CDS             complement(1140..3410)
                     /gene="LOC111211017"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /codon_start=1
                     /product="receptor-like protein 33"
                     /protein_id="XP_048598344.1"
                     /db_xref="GeneID:111211017"
                     /translation="MQTCSSQFPFSCVKNMKGSVKSFSLIPISFCFLFLFRDEFAVPA
                     RHLCHPQQREAILELKKEFQIQKPCFNRSPKTVSWVNNSDCCSWDGIRCDATFGDVIE
                     LNLGGNCIHGELNSKNTILKLQSLPFLATLDLSDNYFSGNIPSSLGNLSKLTTLDLSD
                     NAFNGEIPSSLGKLYNLTILNLSWNNLIGKIPSSFGRLKHLTDLSAEQNKLTGNIPVT
                     LLNLTKLLDLSLDYNQFTGMLPPNVSSLSNLEVFYIDCNALTGTLPSSLFSIPSLLYV
                     TLEDNQLNGTLDFGNVSSSSKLMQLLLGNNNFVGSIPRSISKLVNLDTLDLSHLNTQG
                     LALDLSILWNLKSLVELDISDLNTTTAIDLNDILSRFKWLDKLNLTGNHVTYEKRSSV
                     SDHPSLSYLYLSGCGITTKFLEPLRTQHNMWRLDISNNKIKGQVPGWLWELSTLQYLD
                     LSNNTFTSFESPNKLRQPSSLEYFSGANNNFTGRIPSFICELRSLTVLDLSNNKFNGS
                     FPRCIGKFSSFLEALNLRQNRLSGRLPKKIISRGLKSLDIGHNNFVGKLPRSLIVSSF
                     LEVLNVESNRFNDTFPSWLSSLPELQVLVLRSNAFHGPVHQTRFSKLRIIDISHNRFN
                     GTLPSDFFVNWTAMHSIGKDEDQSYGQYMSIYYYFDSMVLMNKGVEMELVRILTIYTA
                     LDFSENEFEGVIPSSIGLLKELLVLNLSGNAFTGHIPSSMGNLSSLESLDLSRNKLTG
                     AIPQELVLHLDSRWDT"
     gene            4692..>5235
                     /gene="LOC106430932"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:106430932"
     mRNA            4692..>5235
                     /gene="LOC106430932"
                     /product="diaminopimelate decarboxylase 2, chloroplastic"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /transcript_id="XM_013871726.3"
                     /db_xref="GeneID:106430932"
     CDS             4797..>5235
                     /gene="LOC106430932"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /codon_start=1
                     /product="diaminopimelate decarboxylase 2, chloroplastic"
                     /protein_id="XP_013727180.2"
                     /db_xref="GeneID:106430932"
                     /translation="MASATQLLSQPPSLRGNLNRYQSSLPRISVLSLKSTSKPLNRLS
                     VKAAAAASQNSVITPTKDAAFEHCFKKSSDGFLYCEGTKVEEIMESVERRPFYLYSKP
                     QITRNVEAYKEALEGVSSVIGYAIKANNNLKILEHLRSKGCGAVLVSGNELRLALIAG
                     FDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLENIVEASRISGKQVNVLLRINP
                     DVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPNELKLVGAHCHLGSTITKVDI
                     FRDAAVLMVEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS
                     RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIE
                     LVSPPAPEAEVSKFDVVGPVCESADFLGKDRELPTPPKGAGLVVHDAGAYCMSMASTY
                     NLKMRPPEYWVEDDGSITKIRHAETFEDHLRFFNGL"
ORIGIN      
        1 cgtgctctca gttgccaaga ttattaaata cagtactaat tcaatagctt gaactatact
       61 gtagtagtta aattctatcc aatattttat cctttaccaa cccgcgagtg tgttcttcaa
      121 aatgtctgaa gtctgaacag attatggata catcatacat ccaataacaa atgtcaaata
      181 gtattgttta ctctaattaa taacaagtgg caaaatactg ttttctgctc ttgatcaata
      241 ctactaatac tagaatgttg gttatggaaa gtttgggcct tatattttgt ttcacgttct
      301 ctatggctct tggatgaaag cgtttgttga gtgcaacaga tcaatggtaa ccccatggag
      361 ttctcaatat aaaattttca aaatacatat ttatatatgt atgtataata aatattagta
      421 tttaattgtg tataatttta aaatagcact caacaaacgt ttttacacaa catgcaataa
      481 aaaactcgtt tcaaaaacct gccctgtaaa ccgtactact cttttcctct ttaacgagaa
      541 ctaagaagca tctctcctac aaatagttta caaaagatgg gtattcacgt caaatattta
      601 tgttattacg ccgtgatgat ggattctcaa gatacttgac actgctcata tgatatgaca
      661 gaacaaagga agaagtaaaa aagacatgtg tgactgtgaa atcagctact tctgttttac
      721 tgaaacatgg ttcttcagat atagagatac agagagcata gtgaatcaga tacgcacaat
      781 acaaaagatc aaacaacaac taaaacttat aatgtgataa tctgtctgat gcgaaaacaa
      841 aaaatatttg gaatcatctg aaattatttt aatccaacct tctttctttg caggccttct
      901 acttctagtt tggttggttg attttcttct ttgagatttt tcccttaggt ttaagaaagc
      961 tatacaaaat agggaataaa caatacataa ttaattgatt cactgagaca aatctagtat
     1021 atagttttag tttaaaaaaa aaacgagaag attacctctt taacgacgtg tggggcttat
     1081 tcttctgcgt tcggttcggc caaaacggtt gataaaccac tctggtttgt aggaaaccac
     1141 tatgtatccc accgtgaatc caaatgcaat actagctctt gtggaattgc tcccgtaagc
     1201 ttgtttctgg aaaggtccag tgactcgaga gacgagaggt tccccataga tgacgggatg
     1261 tggccagtga aagcattgcc tgataagttg aggacaagga gctctttcaa caaaccgatg
     1321 gacgatggaa tcactccttc aaattcgttc tccgaaaagt ctagagcggt gtagattgtt
     1381 aagatacgta ccagctccat ctctacacct ttgttcatca aaaccattga atcaaaataa
     1441 tagtatatac tcatgtactg tccgtaagat tgatcttcat cttttccaat agagtgcatt
     1501 gctgtccaat taacaaagaa gtccgatggc aacgttccgt tgaaccgatt atgcgatata
     1561 tcgatgatcc gcagtttaga aaaccgagtt tgatgtactg gtccatggaa tgcattggag
     1621 cgaaggacaa gaacttgtag ctcggggaga gaactcagcc aggatggaaa cgtgtcgttg
     1681 aatctgttgc tttccacgtt caaaacttcg agaaaagagc taacgatcaa agatcttgga
     1741 agctttccca caaaattgtt atgaccgatg tccaaagact ttagacctct tgatataatc
     1801 ttctttggaa gacgtccgct gagacgattt tgtctaagat ttagagcttc gagaaaacta
     1861 ctgaactttc cgatacaacg tgggaatgaa ccgttgaatt tgttgttaga taaatcgaga
     1921 acggtgagag agcgcaactc gcatatgaaa ctggggatcc tgcccgtgaa attgttattg
     1981 gcgccggaaa agtattccag agaggatggt tgccggagtt tattcggact ttcgaaactg
     2041 gtgaaagtgt tgttggaaag atccaggtat tgaagagttg atagctccca taaccatcca
     2101 gggacttgac ctttgatttt gttgttggaa atgtctagtc tccacatgtt gtgttgagtt
     2161 cgtaggggct ctagaaactt ggtggtgatt ccgcatcctg acaaatacag atagcttaat
     2221 gacggatgat ctgatactga gcttcgcttt tcatacgtaa cgtggtttcc cgtgagattc
     2281 agtttatcca gccacttgaa acgtgataag atatcattca agtcaatcgc agtggtggtg
     2341 ttcaagtcgg agatgtcgag ttctacgagt gacttgagat tccagagaat gctaaggtca
     2401 agtgctaagc cttgggtgtt gagatgcgaa aggtcaagtg tatcaaggtt gactaatttg
     2461 gagatggatc tgggaatcga tcccacgaag ttgttattcc cgagtagtag ttgcattagc
     2521 tttgatgatg aagatacgtt cccaaaatca agtgtaccgt ttagttggtt atcttccaaa
     2581 gtaacgtaaa gcaaagaagg gatgctaaag agggaagaag gaagagttcc agttaaagcg
     2641 ttgcaatcta tgtaaaagac ctccaagttg gagagtgagc ttacgttagg tggaagcatg
     2701 cctgtgaact gattgtaatc gagtgataaa tctaacaatt ttgttagatt tagtagtgta
     2761 acaggaatgt taccagtaag cttgttctgt tcagcggata agtcagtgag atgtttcaat
     2821 ctgccgaaag aagatgggat tttaccaata aggttgttcc aggagagatt gagaatggtg
     2881 aggttataaa gctttccaag tgaagatggg atttcaccat taaaagcatt atctgaaaga
     2941 tcaagagtgg ttagcttaga aagatttcca agcgaagatg gaatgttacc actgaaataa
     3001 ttgtctgaaa ggtcgagagt tgctaaaaaa ggaagacttt gaagcttcaa aatagtgttt
     3061 ttggaattga gctcgccatg gatgcagttg ccaccaaggt tcagctcaat cacatcccca
     3121 aaagtggcat cacatctgat accatcccaa gaacagcagt cgctgttatt cacccatgac
     3181 accgtcttcg gagaccggtt aaaacaaggc ttctgaatct ggaactcctt cttcaactcc
     3241 agaattgctt ccctttgttg aggatggcac aagtgcctag caggaaccgc aaactcatca
     3301 cgaaataaga agagaaaaca aaaggaaata ggaatgagac taaatgattt cacagagcct
     3361 ttcatattct ttacacagga aaatggaaac tgtgatgaac atgtttgcat gctcgcctta
     3421 taagactata tacagtcttc ccccaccaca aatttctttt ccgtcttttt gtttttgttc
     3481 ttttttccaa cttcttctcc ggtttattat tattttcttc gtatgacttt tctccctttt
     3541 ggtaacgacg agtgtcgacg actcgcatgg ttgacttgac aatttatcca aattcatata
     3601 gcttaattag tttgtactta tcctaattaa atttctataa gcaaaataac tcgctaactt
     3661 ttttgacaaa aataaaactc actaatttac tctcgctgcc gcatatcaac gattatagac
     3721 agtggcggag ccacagtgtt ggcacataga tcaactgacc caggtggatt ttctgttaaa
     3781 aaatttttac ttgtataatt ctataaaaac tatgtaacta ttggtaaatt ttagctagat
     3841 tacccctgta aaatatgtta acttttagag attgaccctc tcaaatgaat ttcctagctc
     3901 cggccactga ttagagtgct agttaatttg ttgactgcgc aattatcgtg cgaaattatg
     3961 tttccatcca aactctatta attttatctc tttactttgc attacaattg tttttttatt
     4021 gaatacaatt aaacattcat attaaaatat tgcaaatttt gaataatgta attcatcgaa
     4081 agtttgaaac agaaaccttt tagaagtgga aatccatttc gttaaatggt ttaactaagg
     4141 gttcattaat atttctacac caagaggttt gagattcaaa tcccaaaaaa tacaaattat
     4201 gaaaaaaaaa tagttataag agatttttag tatggtgcat ggcgtatcat cgaacatgaa
     4261 tttcataggg cgactcagaa tgacccagtc aaacgtatat tctcatatga tgatagaatt
     4321 gtcggataaa attgtcggct gtaatagcat aattaattag acgttaaaaa aaaaactttt
     4381 tagaaagtga caataaatga ataatgtaat tcattgaaag tttgaaacag aaacctttta
     4441 gaaagtgaca acaaatgaaa cataacgtaa ttcattttta gcgaatctat agtattacaa
     4501 agagacctaa acaaatagaa gaatgtaata agtttgccca cgttacacgt agcattaata
     4561 aatgagttta cgacttgact tttctttggg gtttcttcct gggctcatca cttaaatgac
     4621 tcgtcacaaa ttacagcaga ccaacggttc aactaaccac cactccaagt catatcagcg
     4681 gttatccaaa accggacccg acaaagccac gtgtaactta actctttgac aaaaccctag
     4741 tttcagcgcc actgtttcag tctcacttcc aacaactcac aatctctcca ccagccatgg
     4801 cgtcagctac tcagctcctc tcccaacctc catctctccg cggaaaccta aaccgatacc
     4861 aatcctccct cccaagaatc tcggttctgt ctctcaagtc cacctcgaaa ccacttaacc
     4921 gcctctccgt caaagccgcc gccgccgcat cccaaaactc ggtgataacc ccaacgaagg
     4981 atgctgcgtt cgagcactgt ttcaagaagt cctcagatgg gttcctctac tgcgagggaa
     5041 ctaaggttga agagatcatg gagagcgtcg agagaagacc tttctacttg tacagcaagc
     5101 ctcagatcac gaggaacgtc gaggcgtaca aagaggcctt ggaaggtgtg agttccgtca
     5161 ttggctatgc tattaaagcc aataacaacc tcaagattct ggagcatttg aggagtaaag
     5221 gctgtggtgc tgtgc
//

