/**
 * UGENE - Integrated Bioinformatics Tools.
 * Copyright (C) 2008-2017 UniPro <ugene@unipro.ru>
 * http://ugene.net
 *
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU General Public License
 * as published by the Free Software Foundation; either version 2
 * of the License, or (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
 * MA 02110-1301, USA.
 */

#ifndef _U2_DNA_STAT_PROFILE_TASK_H_
#define _U2_DNA_STAT_PROFILE_TASK_H_

#include <QVector>
#include <U2Core/Task.h>

namespace U2 {

class ADVSequenceObjectContext;
class CharOccurTask;
class DinuclOccurTask;
class DNAStatisticsTask;

class DNAStatProfileTask : public Task {
    Q_OBJECT
public:
    DNAStatProfileTask(ADVSequenceObjectContext *context);

    QList <Task*> onSubTaskFinished(Task *subTask);

    QString getResult() const;

private:
    ADVSequenceObjectContext* ctx;
    qint64 seqLen;

    QString charResult;
    QString dinucResult;
    QString statResult;

    CharOccurTask*         charTask;
    DinuclOccurTask*       dinucTask;
    DNAStatisticsTask*    statTask;

    QString formCharResultString() const;
    QString formDinucResultString() const;
    QString formStatResultString() const;
};

}// namespace

#endif // _U2_DNA_STAT_POFILE_TASK_H_
