--*********************************************************************
--
--  featdef.prt
--
--  Definitions for feature display attributes
--  J.Ostell - 1994
--
--*********************************************************************

FeatDefGroupSet ::= {
	groups {
  {
	groupkey 0 ,
	groupname "Unrecognized Features"
  } ,	
  {
	groupkey 1 ,
	groupname "Genes and Named Regions",
  } ,
  {
	groupkey 2 ,
	groupname "Coding Regions and Transcripts",
  } ,
  {
	groupkey 3 ,
	groupname "Structural RNAs",
  } ,
  {
	groupkey 4 ,
	groupname "Bibliographic and Comments",
  } ,
  {
	groupkey 5 ,
	groupname "Sites and Bonds",
  }
	} ,
	defs {
  {                   -- Unrecognized, unsupported feature
    typelabel "???" ,
    menulabel "Unsupported feature" ,
    featdef-key 0 ,
    seqfeat-key 0 ,
    entrygroup 0 ,
    displaygroup 0 ,
    molgroup both
  } ,
  {                   -- Gene
    typelabel "Gene" ,
    menulabel "Gene" ,
    featdef-key 1 ,
    seqfeat-key 1 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Org
    typelabel "Org" ,
    menulabel "Organism" ,
    featdef-key 2 ,
    seqfeat-key 2 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- CdRegion
    typelabel "CDS" ,
    menulabel "Coding Region" ,
    featdef-key 3 ,
    seqfeat-key 3 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Prot
    typelabel "Prot" ,
    menulabel "Protein Names" ,
    featdef-key 4 ,
    seqfeat-key 4 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup aa
  } ,
  {                   -- precursor RNA
    typelabel "preRNA" ,
    menulabel "Precursor RNA" ,
    featdef-key 5 ,
    seqfeat-key 5 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- mRNA
    typelabel "mRNA" ,
    menulabel "Mature Messenger RNA" ,
    featdef-key 6 ,
    seqfeat-key 5 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- tRNA
    typelabel "tRNA" ,
    menulabel "Transfer RNA" ,
    featdef-key 7 ,
    seqfeat-key 5 ,
    entrygroup 3 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- rRNA
    typelabel "rRNA" ,
    menulabel "Ribosomal RNA" ,
    featdef-key 8 ,
    seqfeat-key 5 ,
    entrygroup 3 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- snRNA
    typelabel "snRNA" ,
    menulabel "Small Nuclear RNA" ,
    featdef-key 9 ,
    seqfeat-key 5 ,
    entrygroup 3 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- scRNA
    typelabel "scRNA" ,
    menulabel "Small Cytoplasmic RNA" ,
    featdef-key 10 ,
    seqfeat-key 5 ,
    entrygroup 3 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- other RNA
    typelabel "RNA" ,
    menulabel "Other Types of RNA" ,
    featdef-key 11 ,
    seqfeat-key 5 ,
    entrygroup 3 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- Pub
    typelabel "Cit" ,
    menulabel "Bibliographic Citations" ,
    featdef-key 12 ,
    seqfeat-key 6 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- seq
    typelabel "Xref" ,
    menulabel "Reference to Another Sequence" ,
    featdef-key 13 ,
    seqfeat-key 7 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- unclassified impfeat
    typelabel "Imp" ,
    menulabel "Unclassified ImpFeat" ,
    featdef-key 14 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 0 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "allele" ,
    menulabel "Allelic Varient" ,
    featdef-key 15 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "attenuator" ,
    menulabel "Attenuator" ,
    featdef-key 16 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "C_region" ,
    menulabel "Immunoglobin/T-cell receptor constant region" ,
    featdef-key 17 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "CAAT_signal" ,
    menulabel "CAAT box" ,
    featdef-key 18 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "CDS" ,
    menulabel "Untranslatable coding region" ,
    featdef-key 19 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "conflict" ,
    menulabel "Sequence determinations differ" ,
    featdef-key 20 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "D-loop" ,
    menulabel "Displacement Loop" ,
    featdef-key 21 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "D_segment" ,
    menulabel "Diversity Segment of Immunoglobin" ,
    featdef-key 22 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "enhancer" ,
    menulabel "Enhancer" ,
    featdef-key 23 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "exon" ,
    menulabel "Exon" ,
    featdef-key 24 ,
    seqfeat-key 8 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "GC_signal" ,
    menulabel "GC box" ,
    featdef-key 25 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "iDNA" ,
    menulabel "intervening DNA" ,
    featdef-key 26 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "intron" ,
    menulabel "Intron" ,
    featdef-key 27 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "J_segment" ,
    menulabel "IG joining segment" ,
    featdef-key 28 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "LTR" ,
    menulabel "Long Terminal Repeat" ,
    featdef-key 29 ,
    seqfeat-key 8 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "mat_peptide" ,
    menulabel "Mature Peptide labeled on Nuc Acid" ,
    featdef-key 30 ,
    seqfeat-key 8 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_binding" ,
    menulabel "Miscellaneaous binding site" ,
    featdef-key 31 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_difference" ,
    menulabel "Miscellaneous sequence difference" ,
    featdef-key 32 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_feature" ,
    menulabel "Miscellaneaous feature" ,
    featdef-key 33 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_recomb" ,
    menulabel "Miscellaneous recombination" ,
    featdef-key 34 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_RNA" ,
    menulabel "Miscellaneous RNA" ,
    featdef-key 35 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 3 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_signal" ,
    menulabel "Miscellaneous signal sequence" ,
    featdef-key 36 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "misc_structure" ,
    menulabel "Miscellaneous secondary structure" ,
    featdef-key 37 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "modified_base" ,
    menulabel "Modified base" ,
    featdef-key 38 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "mutation" ,
    menulabel "site of mutation in related strain" ,
    featdef-key 39 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "N_region" ,
    menulabel "Extra na in rearranged IG" ,
    featdef-key 40 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "old_sequence" ,
    menulabel "Location of sequence revision" ,
    featdef-key 41 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "polyA_signal" ,
    menulabel "PolyA addition recognition signal" ,
    featdef-key 42 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "polyA_site" ,
    menulabel "Point where polyA tail begins" ,
    featdef-key 43 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "precursor_RNA" ,
    menulabel "RNA which is a post-transcriptional intermediate" ,
    featdef-key 44 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "prim_transcript" ,
    menulabel "Primary transcript" ,
    featdef-key 45 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "primer_bind" ,
    menulabel "Primer binding site" ,
    featdef-key 46 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "promoter" ,
    menulabel "Promoter" ,
    featdef-key 47 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "protein_bind" ,
    menulabel "Protein binding site" ,
    featdef-key 48 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "RBS" ,
    menulabel "Ribosome binding site" ,
    featdef-key 49 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "repeat_region" ,
    menulabel "Region containing repeats" ,
    featdef-key 50 ,
    seqfeat-key 8 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "repeat_unit" ,
    menulabel "Single repeat unit" ,
    featdef-key 51 ,
    seqfeat-key 8 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "rep_origin" ,
    menulabel "Origin of replication" ,
    featdef-key 52 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "S_region" ,
    menulabel "IG switch region" ,
    featdef-key 53 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "satellite" ,
    menulabel "satellite repeat region" ,
    featdef-key 54 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "sig_peptide" ,
    menulabel "Signal Peptide annotated on Nuc Acid" ,
    featdef-key 55 ,
    seqfeat-key 8 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "source" ,
    menulabel "Source of Nuc Acid" ,
    featdef-key 56 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "stem_loop" ,
    menulabel "Stem loop structure" ,
    featdef-key 57 ,
    seqfeat-key 8 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "STS" ,
    menulabel "Sequence tagged site" ,
    featdef-key 58 ,
    seqfeat-key 8 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "TATA_signal" ,
    menulabel "TATA box" ,
    featdef-key 59 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "terminator" ,
    menulabel "Transcription terminator" ,
    featdef-key 60 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- 
    typelabel "transit_peptide" ,
    menulabel "Transit peptide annotated on Nuc Acid" ,
    featdef-key 61 ,
    seqfeat-key 8 ,
    entrygroup 2 ,
    displaygroup 2 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "unsure" ,
    menulabel "Unsure of exact sequence" ,
    featdef-key 62 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "V_region" ,
    menulabel "IG variable region" ,
    featdef-key 63 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "V_segment" ,
    menulabel "IG variable segment" ,
    featdef-key 64 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "variation" ,
    menulabel "Strain differences" ,
    featdef-key 65 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "virion" ,
    menulabel "Viral genome" ,
    featdef-key 66 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "3'clip" ,
    menulabel "3' region of transcript clipped off in processing" ,
    featdef-key 67 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "3'UTR" ,
    menulabel "3' untranslated region" ,
    featdef-key 68 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "5'clip" ,
    menulabel "5' region of transcript clipped off in processing" ,
    featdef-key 69 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "5'UTR" ,
    menulabel "5' untranslated region" ,
    featdef-key 70 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 1 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "-10_signal" ,
    menulabel "Pribnow box" ,
    featdef-key 71 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "-35_signal" ,
    menulabel "-35 region of transcription start" ,
    featdef-key 72 ,
    seqfeat-key 8 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- Imp
    typelabel "Site-ref" ,
    menulabel "SITES type reference" ,
    featdef-key 73 ,
    seqfeat-key 8 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup na
  } ,
  {                   -- region
    typelabel "Region" ,
    menulabel "Named region of sequence" ,
    featdef-key 74 ,
    seqfeat-key 9 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup both
  } ,
  {                   -- comment
    typelabel "Comment" ,
    menulabel "Comment associated with sequence" ,
    featdef-key 75 ,
    seqfeat-key 10 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- bond
    typelabel "Bond" ,
    menulabel "Chemical bonds" ,
    featdef-key 76 ,
    seqfeat-key 11 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup aa
  } ,
  {                   -- site
    typelabel "Site" ,
    menulabel "Binding/Active Sites" ,
    featdef-key 77 ,
    seqfeat-key 12 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup both
  } ,
  {                   -- rsite
    typelabel "Rsite" ,
    menulabel "Restriction Sites" ,
    featdef-key 78 ,
    seqfeat-key 13 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- user
    typelabel "User" ,
    menulabel "User Defined feature" ,
    featdef-key 79 ,
    seqfeat-key 14 ,
    entrygroup 0 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- txinit
    typelabel "TxInit" ,
    menulabel "Transcription Initiation Site" ,
    featdef-key 80 ,
    seqfeat-key 15 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup na
  } ,
  {                   -- num
    typelabel "Num" ,
    menulabel "Numbering System for Sequence" ,
    featdef-key 81 ,
    seqfeat-key 16 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  } ,
  {                   -- psec-str
    typelabel "SecStr" ,
    menulabel "Protein Secondary Structure" ,
    featdef-key 82 ,
    seqfeat-key 17 ,
    entrygroup 1 ,
    displaygroup 1 ,
    molgroup aa
  } ,
  {                   -- non-std-residue
    typelabel "NonStdRes" ,
    menulabel "Non-standard Residue" ,
    featdef-key 83 ,
    seqfeat-key 18 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup aa
  } ,
  {                   -- het
    typelabel "Het" ,
    menulabel "Heterogen" ,
    featdef-key 84 ,
    seqfeat-key 19 ,
    entrygroup 5 ,
    displaygroup 5 ,
    molgroup aa
  } ,
  {                   -- biosrc
    typelabel "Src" ,
    menulabel "Biological Source" ,
    featdef-key 85 ,
    seqfeat-key 20 ,
    entrygroup 4 ,
    displaygroup 4 ,
    molgroup both
  }
}
}

