USAGE
  dustmasker [-h] [-help] [-xmlhelp] [-in input_file_name]
    [-out output_file_name] [-window window_size] [-level level]
    [-linker linker] [-infmt input_format] [-outfmt output_format]
    [-parse_seqids] [-hard_masking] [-version-full] [-version-full-xml]
    [-version-full-json]

DESCRIPTION
   Low complexity region masker based on Symmetric DUST algorithm

OPTIONAL ARGUMENTS
 -h
   Print USAGE and DESCRIPTION;  ignore all other parameters
 -help
   Print USAGE, DESCRIPTION and ARGUMENTS; ignore all other parameters
 -xmlhelp
   Print USAGE, DESCRIPTION and ARGUMENTS in XML format; ignore all other
   parameters
 -in <File_In>
   input file name
   Default = `-'
 -out <File_Out>
   output file name
   Default = `-'
 -window <Integer>
   DUST window length
   Default = `64'
 -level <Integer>
   DUST level (score threshold for subwindows)
   Default = `20'
 -linker <Integer>
   DUST linker (how close masked intervals should be to get merged together).
   Default = `1'
 -infmt <String>
   input format (possible values: fasta, blastdb)
   Default = `fasta'
 -outfmt <String, `acclist', `fasta', `interval', `maskinfo_asn1_bin',
                  `maskinfo_asn1_text', `maskinfo_xml', `seqloc_asn1_bin',
                  `seqloc_asn1_text', `seqloc_xml'>
   output format
   Default = `interval'
 -parse_seqids
   Parse Seq-ids in FASTA input
 -hard_masking
   Use hard masking for fasta outfmt
 -version-full
   Print extended version data;  ignore other arguments
 -version-full-xml
   Print extended version data in XML format;  ignore other arguments
 -version-full-json
   Print extended version data in JSON format;  ignore other arguments