<?xml version="1.0" encoding="UTF-8"?>
<mime-info xmlns="http://www.freedesktop.org/standards/shared-mime-info">

  <mime-type type="application/x-ugene-uprj">
    <comment>Unipro UGENE project file</comment>
    <comment xml:lang="en">Unipro UGENE project file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.uprj"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-uwl">
    <comment>UGENE Workflow Language</comment>
    <comment xml:lang="en">UGENE Workflow Language</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.uwl"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-uql">
    <comment>UGENE Query Language</comment>
    <comment xml:lang="en">UGENE Query Language</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.uql"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-abi">
    <comment>ABIF file</comment>
    <comment xml:lang="en">ABIF file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.ab1"/>
    <glob pattern="*.abi"/>
    <glob pattern="*.abif"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-aln">
    <comment>Clustal alignment file</comment>
    <comment xml:lang="en">Clustal alignment file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.aln"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-embl">
    <comment>EMBL file</comment>
    <comment xml:lang="en">EMBL file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.em"/>
    <glob pattern="*.emb"/>
    <glob pattern="*.embl"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-sw">
    <comment>Swiss-Prot file</comment>
    <comment xml:lang="en">Swiss-Prot file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.sw"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-fa">
    <comment>FASTA sequence file</comment>
    <comment xml:lang="en">FASTA sequence file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.fa"/>
    <glob pattern="*.mpfa"/>
    <glob pattern="*.fna"/>
    <glob pattern="*.fsa"/>
    <glob pattern="*.fas"/>
    <glob pattern="*.fasta"/>
    <glob pattern="*.seq"/>
    <glob pattern="*.seqs"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-fastq">
    <comment>FASTQ file</comment>
    <comment xml:lang="en">FASTQ file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.fastq"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-gb">
    <comment>Genbank plain text file</comment>
    <comment xml:lang="en">Genbank plain text file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.gb"/>
    <glob pattern="*.gbk"/>
    <glob pattern="*.gen"/>
    <glob pattern="*.genbank"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-gff">
    <comment>GFF file</comment>
    <comment xml:lang="en">GFF file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.gff"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-msf">
    <comment>MSF multiple sequence file</comment>
    <comment xml:lang="en">MSF multiple sequence file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.msf"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-newick">
    <comment>NEWICK tree file</comment>
    <comment xml:lang="en">NEWICK tree file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.newick"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-pdb">
    <comment>Protein Data Bank file</comment>
    <comment xml:lang="en">Protein Data Bank file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.pdb"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-sam-bam">
    <comment>SAM/BAM genome assembly</comment>
    <comment xml:lang="en">SAM/BAM genome assembly</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.sam"/>
    <glob pattern="*.bam"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-srfa">
    <comment>FASTA short reads file</comment>
    <comment xml:lang="en">FASTA short reads file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.srfa"/>
    <glob pattern="*.srfasta"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-sto">
    <comment>Stockholm alignment file</comment>
    <comment xml:lang="en">Stockholm alignment file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.sto"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-db">
    <comment>UGENE Database file</comment>
    <comment xml:lang="en">UGENE Database file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.ugenedb"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-scf">
    <comment>SCF file</comment>
    <comment xml:lang="en">SCF file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.scf"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-mmdb">
    <comment>MMDB file</comment>
    <comment xml:lang="en">MMDB file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.prt"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-hmm">
    <comment>HMMER file</comment>
    <comment xml:lang="en">HMMER file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.hmm"/>
    <icon name="application-x-ugene-ext"/>
  </mime-type>

  <mime-type type="application/x-ugene-hmm">
    <comment>ACE file</comment>
    <comment xml:lang="en">ACE file</comment>
    <sub-class-of type="text/plain"/>
    <glob pattern="*.ace"/>
    <icon name="application-x-ugene-ext"/>
    <magic priority="50">
        <match type="string" offset="0" value="AS "/>
     </magic>
  </mime-type>

</mime-info>

