# File wscripts/gb.awk, postprocessing commands used by blast_search script # $Id: gb.awk,v 1.1 1997/03/28 12:59:54 mieg Exp $ BEGIN { state = 0 ;} /^ACCESSION/ {seq = "GB:"$2 ; printf("\nSequence %s\nDatabase GenBank %s\n",seq,$2); next;} /^TITLE/ {printf("Title \"%s\n", substr($0,6)) ; next ;} /^\/\// {state = 0 ; printf("\n") ; next; } /^ORIGIN/ {printf ("DNA %s\n\n",seq) ; state = 2 ; next ;} { if (state == 2) { printf("DNA %s\n", seq) ; state = 3 ; next ; } if (state == 3) { pp = $0 ; gsub(/[0-9]/,"",pp) ; gsub(/ /,"",pp) ; gsub(/\//,"",pp) ; printf("%s\n", pp) ; } }