Index of /~birch/birchhomedir/java/Mesquite_Folder/mesquite/lib/duties

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]EditingCurator.class2021-08-18 13:47 129  
[ ]CellColorerTaxa.class2021-08-18 13:47 131  
[ ]NEXUSInterpreter.class2021-08-18 13:47 133  
[ ]CellColorerMatrix.class2021-08-18 13:47 135  
[ ]NumForCharTreeDep.class2021-08-18 13:47 135  
[ ]NumForCharTreeIndep.class2021-08-18 13:47 139  
[ ]CellColorerCharacters.class2021-08-18 13:47 143  
[ ]CuratorWithSettings.class2021-08-18 13:47 168  
[ ]NumberForCharacterIncr.class2021-08-18 13:47 179  
[ ]TreeTransformerMult.class2021-08-18 13:47 257  
[ ]ReadFileFromString.class2021-08-18 13:47 284  
[ ]FileInitEarlyLoad.class2021-08-18 13:47 328  
[ ]TaxaDisplayAssistantAD.class2021-08-18 13:47 355  
[ ]TreeDisplayAssistantAD.class2021-08-18 13:47 355  
[ ]CellColorer.class2021-08-18 13:47 371  
[ ]CharSubmodelCurator.class2021-08-18 13:47 438  
[ ]WholeCharModelCurator.class2021-08-18 13:47 444  
[ ]ElementManager.class2021-08-18 13:47 483  
[ ]BooleanForItem.class2021-08-18 13:47 524  
[ ]TreeAlterer.class2021-08-18 13:47 527  
[ ]FileAssistant.class2021-08-18 13:47 531  
[ ]NodeLocsPlot.class2021-08-18 13:47 531  
[ ]NodeLocsFree.class2021-08-18 13:47 535  
[ ]FileInterpreterITree.class2021-08-18 13:47 545  
[ ]FileAssistantT.class2021-08-18 13:47 546  
[ ]FileAssistantM.class2021-08-18 13:47 547  
[ ]FileAssistantN.class2021-08-18 13:47 548  
[ ]FileAssistantA.class2021-08-18 13:47 549  
[ ]FileAssistantCP.class2021-08-18 13:47 559  
[ ]NodeChooser.class2021-08-18 13:47 565  
[ ]ScattergramAssistantA.class2021-08-18 13:47 569  
[ ]HistogramAssistantA.class2021-08-18 13:47 571  
[ ]TaxaWindowAssistantI.class2021-08-18 13:47 576  
[ ]TreeWindowAssistantI.class2021-08-18 13:47 576  
[ ]DataWindowAssistantA.class2021-08-18 13:47 578  
[ ]TaxaWindowAssistantN.class2021-08-18 13:47 579  
[ ]TreeWindowAssistantN.class2021-08-18 13:47 579  
[ ]TaxaDisplayAssistantI.class2021-08-18 13:47 581  
[ ]TreeDisplayAssistantI.class2021-08-18 13:47 581  
[ ]TreeWindowAssistantA.class2021-08-18 13:47 582  
[ ]TaxaDisplayAssistantA.class2021-08-18 13:47 587  
[ ]Consenser.class2021-08-18 13:47 589  
[ ]TreeWindowAssistantOA.class2021-08-18 13:47 591  
[ ]NumberForTreeIncr.class2021-08-18 13:47 596  
[ ]TaxaWindowAssistant.class2021-08-18 13:47 599  
[ ]TreeAltererMult.class2021-08-18 13:47 599  
[ ]BooleanForTreeIncr.class2021-08-18 13:47 601  
[ ]NumberForTaxonIncr.class2021-08-18 13:47 601  
[ ]NumberFor2TaxaIncr.class2021-08-18 13:47 602  
[ ]MesquiteInit.class2021-08-18 13:47 603  
[ ]TaxaDisplayAssistantMA.class2021-08-18 13:47 607  
[ ]TraceCharacterInit.class2021-08-18 13:47 612  
[ ]NumbersForNodesIncr.class2021-08-18 13:47 614  
[ ]StringMatcher.class2021-08-18 13:47 615  
[ ]TWindowMaker.class2021-08-18 13:47 619  
[ ]CharMatrixOneSource.class2021-08-18 13:47 621  
[ ]FileInit.class2021-08-18 13:47 622  
[ ]PackageIntroInterface.class2021-08-18 13:47 626  
[ ]UtilitiesAssistant.class2021-08-18 13:47 627  
[ ]TSrcCompatibilityTest.class2021-08-18 13:47 645  
[ ]MatrixCharter.class2021-08-18 13:47 647  
[ ]TaxaTableAssistantI.class2021-08-18 13:47 647  
[ ]DistanceBetween2Trees.class2021-08-18 13:47 653  
[ ]TaxaDisplayAssistant.class2021-08-18 13:47 655  
[ ]TaxonUtility.class2021-08-18 13:47 659  
[ ]TaxaDisplayAssistantD.class2021-08-18 13:47 666  
[ ]TreeDisplayAssistantD.class2021-08-18 13:47 666  
[ ]ScriptingManager.class2021-08-18 13:47 670  
[ ]TaxaDisplayAssistantDI.class2021-08-18 13:47 674  
[ ]TreeDisplayAssistantDI.class2021-08-18 13:47 674  
[ ]TreeDisplayAssistantAO.class2021-08-18 13:47 678  
[ ]WindowHolder.class2021-08-18 13:47 685  
[ ]NumberForNode.class2021-08-18 13:47 692  
[ ]ExternalTreeSearcher.class2021-08-18 13:47 698  
[ ]IncrementalConsenser.class2021-08-18 13:47 704  
[ ]GeneralFileMaker.class2021-08-18 13:47 709  
[ ]NodeLocsCircle.class2021-08-18 13:47 712  
[ ]ParametersExplorer.class2021-08-18 13:47 713  
[ ]TaxaWindowMaker.class2021-08-18 13:47 722  
[ ]NodeLocsVH.class2021-08-18 13:47 724  
[ ]NumberForItem.class2021-08-18 13:47 726  
[ ]ManagerAssistant.class2021-08-18 13:47 728  
[ ]TaxaSelectCoordinator.class2021-08-18 13:47 730  
[ ]CharMatrixSource.class2021-08-18 13:47 736  
[ ]BranchNamesAlterer.class2021-08-18 13:47 740  
[ ]CharacterOneSource.class2021-08-18 13:47 741  
[ ]NodeLocsUnrooted.class2021-08-18 13:47 742  
[ ]CharSelectCoordinator.class2021-08-18 13:47 743  
[ ]BrowseHierarchy.class2021-08-18 13:47 753  
[ ]NexusFileInterpreter.class2021-08-18 13:47 759  
[ ]NumberForCharAndTaxon.class2021-08-18 13:47 764  
[ ]EmployeeTree.class2021-08-18 13:47 773  
[ ]TreeDisplayAssistantA.class2021-08-18 13:47 773  
[ ]TaxaPartitionSource.class2021-08-18 13:47 789  
[ ]TreeDisplayAssistantMA.class2021-08-18 13:47 793  
[ ]TaxaSource.class2021-08-18 13:47 797  
[ ]FileAssistantCH.class2021-08-18 13:47 804  
[ ]ModelsetNexusCommandTest.class2021-08-18 13:47 812  
[ ]BranchNamesAltererMult.class2021-08-18 13:47 819  
[ ]EditRawNexusBlock.class2021-08-18 13:47 824  
[ ]AnalyticalDrawTree.class2021-08-18 13:47 828  
[ ]BranchLengthsAlterer.class2021-08-18 13:47 845  
[ ]CharTableAssistantI.class2021-08-18 13:47 848  
[ ]FileInterpreterI.class2021-08-18 13:47 855  
[ ]DisplayCharsStsAtNodes.class2021-08-18 13:47 857  
[ ]ItemsSource.class2021-08-18 13:47 861  
[ ]NumberFor2Characters.class2021-08-18 13:47 864  
[ ]CharacterSelector.class2021-08-18 13:47 874  
[ ]TreeSwapper.class2021-08-18 13:47 886  
[ ]TaxonSelector.class2021-08-18 13:47 904  
[ ]TextDisplayer.class2021-08-18 13:47 917  
[ ]CharsStatesForNodes.class2021-08-18 13:47 919  
[ ]DataWindowAssistantI.class2021-08-18 13:47 925  
[ ]BranchLengthsAltererMult.class2021-08-18 13:47 926  
[ ]FileAssistantC.class2021-08-18 13:47 947  
[ ]CharacterModelSource.class2021-08-18 13:47 958  
[ ]TreeUtility.class2021-08-18 13:47 972  
[ ]DataWindowAssistantID.class2021-08-18 13:47 1.0K 
[ ]DisplayStatesAtNodes.class2021-08-18 13:47 1.0K 
[ ]DrawTaxa.class2021-08-18 13:47 1.0K 
[ ]NumberFor2CharAndTree.class2021-08-18 13:47 1.0K 
[ ]NumberFor2Trees.class2021-08-18 13:47 1.0K 
[ ]BooleanForTreeM.class2021-08-18 13:47 1.0K 
[ ]MatrixInfoPanelAssistantI.class2021-08-18 13:47 1.0K 
[ ]DataWSelectionAssistant.class2021-08-18 13:47 1.0K 
[ ]FileAssistantCS.class2021-08-18 13:47 1.1K 
[ ]TreeInfoPanelAssistant.class2021-08-18 13:47 1.1K 
[ ]TreeWindowAssistant.class2021-08-18 13:47 1.1K 
[ ]ChartAssistant.class2021-08-18 13:47 1.1K 
[ ]TaxaManager.class2021-08-18 13:47 1.1K 
[ ]MatrixInfoPanelAssistant.class2021-08-18 13:47 1.1K 
[ ]DrawNamesTaxaDisplay.class2021-08-18 13:47 1.1K 
[ ]NumberForTreeWContext.class2021-08-18 13:47 1.1K 
[ ]DrawChart.class2021-08-18 13:47 1.1K 
[ ]NumberForTreeM.class2021-08-18 13:47 1.2K 
[ ]NumbersForNodesAndChar.class2021-08-18 13:47 1.2K 
[ ]TreeWindowMaker.class2021-08-18 13:47 1.2K 
[ ]NumbersForNodesAndHistory.class2021-08-18 13:47 1.2K 
[ ]DataWindowMaker.class2021-08-18 13:47 1.2K 
[ ]NumbersForNodesAndMatrix.class2021-08-18 13:47 1.2K 
[ ]NumForCharHistAndTree.class2021-08-18 13:47 1.2K 
[ ]DataUtility.class2021-08-18 13:47 1.2K 
[ ]TreeSimulate.class2021-08-18 13:47 1.3K 
[ ]NumFor2CharHistAndTree.class2021-08-18 13:47 1.3K 
[ ]CharMapper.class2021-08-18 13:47 1.3K 
[ ]FileElementManager.class2021-08-18 13:47 1.4K 
[ ]NumberForCharAndTreeM.class2021-08-18 13:47 1.4K 
[ ]TaxonNameStyler.class2021-08-18 13:47 1.4K 
[ ]TreeWDIAssistant.class2021-08-18 13:47 1.4K 
[ ]TreeDisplayAssistant.class2021-08-18 13:47 1.4K 
[ ]NumbersForNodes.class2021-08-18 13:47 1.4K 
[ ]CharacterSource.class2021-08-18 13:47 1.4K 
[ ]DrawTree.class2021-08-18 13:47 1.5K 
[ ]CharactersManager.class2021-08-18 13:47 1.5K 
[ ]TreeTransformer.class2021-08-18 13:47 1.6K 
[ ]OneTreeSource.class2021-08-18 13:47 1.6K 
[ ]DrawNamesTreeDisplay.class2021-08-18 13:47 1.6K 
[ ]NodeLocs.class2021-08-18 13:47 1.6K 
[ ]ItemsCharter.class2021-08-18 13:47 1.6K 
[ ]ItemsBiplotter.class2021-08-18 13:47 1.7K 
[ ]FileProcessor.class2021-08-18 13:47 1.7K 
[ ]BooleanForTree.class2021-08-18 13:47 1.7K 
[ ]MatrixSourceCoord.class2021-08-18 13:47 1.7K 
[ ]TaxaWindowAssistantC.class2021-08-18 13:47 1.8K 
[ ]TreeWindowAssistantC.class2021-08-18 13:47 1.8K 
[ ]CharacterSimulator.class2021-08-18 13:47 1.8K 
[ ]CharStatesForNodes.class2021-08-18 13:47 1.8K 
[ ]CharSourceCoord.class2021-08-18 13:47 1.9K 
[ ]DataWindowAssistant.class2021-08-18 13:47 1.9K 
[ ]DrawTaxaCoordinator.class2021-08-18 13:47 2.0K 
[ ]NumberForTaxaBlock.class2021-08-18 13:47 2.0K 
[ ]BooleanForTaxon.class2021-08-18 13:47 2.0K 
[ ]NumberForTreeBlock.class2021-08-18 13:47 2.1K 
[ ]NumberForTaxon.class2021-08-18 13:47 2.1K 
[ ]TaxonNameAlterer.class2021-08-18 13:47 2.1K 
[ ]TreesManager.class2021-08-18 13:47 2.1K 
[ ]BooleanForCharacter.class2021-08-18 13:47 2.2K 
[ ]DisplayNumbersAtNodes.class2021-08-18 13:47 2.2K 
[ ]CharMatrixObedSource.class2021-08-18 13:47 2.3K 
[ ]DrawTreeCoordinator.class2021-08-18 13:47 2.3K 
[ ]TaxonPairSource.class2021-08-18 13:47 2.3K 
[ ]DefaultsAssistant.class2021-08-18 13:47 2.3K 
[ ]NumberFor2Taxa.class2021-08-18 13:47 2.5K 
[ ]NumberForMatrix.class2021-08-18 13:47 2.5K 
[ ]DataMatcher.class2021-08-18 13:47 2.6K 
[ ]NumberArrayForMatrix.class2021-08-18 13:47 2.6K 
[ ]NumberForCharacter.class2021-08-18 13:47 2.7K 
[ ]TreeSourceDefinite.class2021-08-18 13:47 2.8K 
[ ]DataSearcher.class2021-08-18 13:47 2.8K 
[ ]DataColumnNamesAssistant.class2021-08-18 13:47 2.8K 
[ ]TaxonSource.class2021-08-18 13:47 2.8K 
[ ]NumberForTree.class2021-08-18 13:47 2.8K 
[ ]NumberForMatrixAndTree.class2021-08-18 13:47 3.0K 
[ ]PackageIntro.class2021-08-18 13:47 3.0K 
[ ]NumberForCharAndTree.class2021-08-18 13:47 3.0K 
[ ]SpecsSetManager.class2021-08-18 13:47 3.1K 
[ ]DataAltererCon.class2021-08-18 13:47 3.2K 
[ ]CharMatrixFiller.class2021-08-18 13:47 3.3K 
[ ]MatrixSourceCoordObed.class2021-08-18 13:47 3.4K 
[ ]CharHistorySource.class2021-08-18 13:47 3.4K 
[ ]TreeSearcher.class2021-08-18 13:47 3.6K 
[ ]FileCoordinator.class2021-08-18 13:47 3.7K 
[ ]TreeBlockFiller.class2021-08-18 13:47 3.8K 
[ ]TreeBlockSource.class2021-08-18 13:47 3.8K 
[ ]TreeSource.class2021-08-18 13:47 4.2K 
[ ]DataAlterer.class2021-08-18 13:47 4.4K 
[ ]CharacterObedSource.class2021-08-18 13:47 4.8K 
[ ]ManageModelSet.class2021-08-18 13:47 4.8K 
[ ]CharSourceCoordObed.class2021-08-18 13:47 4.9K 
[ ]CharModelCurator.class2021-08-18 13:47 7.2K 
[ ]NumbersForNodesWith2Char.class2021-08-18 13:47 8.0K 
[ ]TreeInferer.class2021-08-18 13:47 8.4K 
[ ]FileInterpreter.class2021-08-18 13:47 12K 
[ ]CharSpecsSetManager.class2021-08-18 13:47 14K 
[ ]CharMatrixManager.class2021-08-18 13:47 15K 
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