:>"^Lã@s dZGdd„deƒZdS)z6Useful utilities for helping in parsing GenBank files.c@sFeZdZdZdgZedd„Zdd„Zdd„Zd S) ÚFeatureValueCleanera§Provide specialized capabilities for cleaning up values in features. This class is designed to provide a mechanism to clean up and process values in the key/value pairs of GenBank features. This is useful because in cases like:: /translation="MED YDPWNLRFQSKYKSRDA" you'll end up with a value with \012s and spaces in it like:: "MED\012 YDPWEL..." which you probably don't want. This cleaning needs to be done on a case by case basis since it is impossible to interpret whether you should be concatenating everything (as in translations), or combining things with spaces (as might be the case with /notes). Ú translationcCs ||_dS)z-Initialize with the keys we should deal with.N)Ú _to_process)ÚselfZ to_process©rú6/tmp/pip-build-ww9dw3qa/biopython/Bio/GenBank/utils.pyÚ__init__!szFeatureValueCleaner.__init__c Cs[||jkrWy#t|d|ƒ}||ƒ}Wn"tk rVtd|ƒ‚YnX|S)z—Clean the specified value and return it. If the value is not specified to be dealt with, the original value will be returned. z _clean_%szNo function to clean key: %s)rÚgetattrÚAttributeErrorÚAssertionError)rZkey_nameÚvalueZcleanerrrrÚ clean_value%s zFeatureValueCleaner.clean_valuecCs|jƒ}dj|ƒS)zEConcatenate a translation value to one long protein string (PRIVATE).Ú)ÚsplitÚjoin)rr Ztranslation_partsrrrÚ_clean_translation3s z&FeatureValueCleaner._clean_translationN)Ú__name__Ú __module__Ú __qualname__Ú__doc__Zkeys_to_processrr rrrrrr s   rN)rÚobjectrrrrrÚs