:>"^(ã@s\dZddlmZGdd„deƒZGdd„deƒZGdd„deƒZd S) z=Class that maps (chain_id, residue_id) to a residue property.é)Úprint_functionc@sjeZdZdZdd„Zdd„Zdd„Zdd „Zd d „Zd d „Z dd„Z dS)ÚAbstractPropertyMapz4Define base class, map holder of residue properties.cCs||_||_||_dS)zInitialize the class.N)Ú property_dictÚ property_keysÚ property_list)Úselfrrr©rú@/tmp/pip-build-ww9dw3qa/biopython/Bio/PDB/AbstractPropertyMap.pyÚ__init__s  zAbstractPropertyMap.__init__cCs|S)z#Return entity identifier (PRIVATE).r)rZ entity_idrrr Ú _translate_idsz!AbstractPropertyMap._translate_idcCs|j|ƒ}||jkS)a|Check if the mapping has a property for this residue. :param chain_id: chain id :type chain_id: char :param res_id: residue id :type res_id: char Examples -------- This is an incomplete but illustrative example:: if (chain_id, res_id) in apmap: res, prop = apmap[(chain_id, res_id)] )r r)rÚidÚ translated_idrrr Ú __contains__sz AbstractPropertyMap.__contains__cCs|j|ƒ}|j|S)a Return property for a residue. :param chain_id: chain id :type chain_id: char :param res_id: residue id :type res_id: int or (char, int, char) :return: some residue property :rtype: anything (can be a tuple) )r r)rÚkeyr rrr Ú __getitem__.s zAbstractPropertyMap.__getitem__cCs t|jƒS)z€Return number of residues for which the property is available. :return: number of residues :rtype: int )Úlenr)rrrr Ú__len__=szAbstractPropertyMap.__len__cCs|jS)z«Return the list of residues. :return: list of residues for which the property was calculated :rtype: [(chain_id, res_id), (chain_id, res_id),...] )r)rrrr ÚkeysEszAbstractPropertyMap.keysccs3x,tdt|jƒƒD]}|j|VqWdS)a Iterate over the (entity, property) list. Handy alternative to the dictionary-like access. :return: iterator Examples -------- >>> for (res, property) in iter(map): ... print(res, property) ... rN)Úrangerr)rÚirrr Ú__iter__MszAbstractPropertyMap.__iter__N) Ú__name__Ú __module__Ú __qualname__Ú__doc__r r rrrrrrrrr r s       rc@s.eZdZdZdd„Zdd„ZdS)ÚAbstractResiduePropertyMapz(Define class for residue properties map.cCstj||||ƒdS)zInitialize the class.N)rr )rrrrrrr r bsz#AbstractResiduePropertyMap.__init__cCs4|\}}t|tƒr0|d|dff}|S)z.Return entity identifier on residue (PRIVATE).ú )Ú isinstanceÚint)rÚent_idÚchain_idÚres_idrrr r fs z(AbstractResiduePropertyMap._translate_idN)rrrrr r rrrr r_s  rc@s.eZdZdZdd„Zdd„ZdS)ÚAbstractAtomPropertyMapz%Define class for atom properties map.cCstj||||ƒdS)zInitialize the class.N)rr )rrrrrrr r qsz AbstractAtomPropertyMap.__init__cCsjt|ƒdkr'|\}}}}n|\}}}d}t|tƒrf|d|df||f}|S)z,Return entity identifier on atoms (PRIVATE).éNr)rrr)rrr r!Z atom_nameZicoderrr r usz%AbstractAtomPropertyMap._translate_idN)rrrrr r rrrr r"ns  r"N)rÚ __future__rÚobjectrrr"rrrr ÚsR