m4trace:configure.ac:26: -1- AC_INIT([HTSlib], [1.10.2], [samtools-help@lists.sourceforge.net], [], [http://www.htslib.org/])
m4trace:configure.ac:26: -1- m4_pattern_forbid([^_?A[CHUM]_])
m4trace:configure.ac:26: -1- m4_pattern_forbid([_AC_])
m4trace:configure.ac:26: -1- m4_pattern_forbid([^LIBOBJS$], [do not use LIBOBJS directly, use AC_LIBOBJ (see section `AC_LIBOBJ vs LIBOBJS'])
m4trace:configure.ac:26: -1- m4_pattern_allow([^AS_FLAGS$])
m4trace:configure.ac:26: -1- m4_pattern_forbid([^_?m4_])
m4trace:configure.ac:26: -1- m4_pattern_forbid([^dnl$])
m4trace:configure.ac:26: -1- m4_pattern_forbid([^_?AS_])
m4trace:configure.ac:26: -1- AC_SUBST([SHELL])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([SHELL])
m4trace:configure.ac:26: -1- m4_pattern_allow([^SHELL$])
m4trace:configure.ac:26: -1- AC_SUBST([PATH_SEPARATOR])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PATH_SEPARATOR])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PATH_SEPARATOR$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_NAME], [m4_ifdef([AC_PACKAGE_NAME],      ['AC_PACKAGE_NAME'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_NAME])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_NAME$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_TARNAME], [m4_ifdef([AC_PACKAGE_TARNAME],   ['AC_PACKAGE_TARNAME'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_TARNAME])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_TARNAME$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_VERSION], [m4_ifdef([AC_PACKAGE_VERSION],   ['AC_PACKAGE_VERSION'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_VERSION])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_VERSION$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_STRING], [m4_ifdef([AC_PACKAGE_STRING],    ['AC_PACKAGE_STRING'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_STRING])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_STRING$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_BUGREPORT], [m4_ifdef([AC_PACKAGE_BUGREPORT], ['AC_PACKAGE_BUGREPORT'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_BUGREPORT])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_BUGREPORT$])
m4trace:configure.ac:26: -1- AC_SUBST([PACKAGE_URL], [m4_ifdef([AC_PACKAGE_URL],       ['AC_PACKAGE_URL'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([PACKAGE_URL])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_URL$])
m4trace:configure.ac:26: -1- AC_SUBST([exec_prefix], [NONE])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([exec_prefix])
m4trace:configure.ac:26: -1- m4_pattern_allow([^exec_prefix$])
m4trace:configure.ac:26: -1- AC_SUBST([prefix], [NONE])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([prefix])
m4trace:configure.ac:26: -1- m4_pattern_allow([^prefix$])
m4trace:configure.ac:26: -1- AC_SUBST([program_transform_name], [s,x,x,])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([program_transform_name])
m4trace:configure.ac:26: -1- m4_pattern_allow([^program_transform_name$])
m4trace:configure.ac:26: -1- AC_SUBST([bindir], ['${exec_prefix}/bin'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([bindir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^bindir$])
m4trace:configure.ac:26: -1- AC_SUBST([sbindir], ['${exec_prefix}/sbin'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([sbindir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^sbindir$])
m4trace:configure.ac:26: -1- AC_SUBST([libexecdir], ['${exec_prefix}/libexec'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([libexecdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^libexecdir$])
m4trace:configure.ac:26: -1- AC_SUBST([datarootdir], ['${prefix}/share'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([datarootdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^datarootdir$])
m4trace:configure.ac:26: -1- AC_SUBST([datadir], ['${datarootdir}'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([datadir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^datadir$])
m4trace:configure.ac:26: -1- AC_SUBST([sysconfdir], ['${prefix}/etc'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([sysconfdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^sysconfdir$])
m4trace:configure.ac:26: -1- AC_SUBST([sharedstatedir], ['${prefix}/com'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([sharedstatedir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^sharedstatedir$])
m4trace:configure.ac:26: -1- AC_SUBST([localstatedir], ['${prefix}/var'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([localstatedir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^localstatedir$])
m4trace:configure.ac:26: -1- AC_SUBST([includedir], ['${prefix}/include'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([includedir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^includedir$])
m4trace:configure.ac:26: -1- AC_SUBST([oldincludedir], ['/usr/include'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([oldincludedir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^oldincludedir$])
m4trace:configure.ac:26: -1- AC_SUBST([docdir], [m4_ifset([AC_PACKAGE_TARNAME],
				     ['${datarootdir}/doc/${PACKAGE_TARNAME}'],
				     ['${datarootdir}/doc/${PACKAGE}'])])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([docdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^docdir$])
m4trace:configure.ac:26: -1- AC_SUBST([infodir], ['${datarootdir}/info'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([infodir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^infodir$])
m4trace:configure.ac:26: -1- AC_SUBST([htmldir], ['${docdir}'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([htmldir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^htmldir$])
m4trace:configure.ac:26: -1- AC_SUBST([dvidir], ['${docdir}'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([dvidir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^dvidir$])
m4trace:configure.ac:26: -1- AC_SUBST([pdfdir], ['${docdir}'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([pdfdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^pdfdir$])
m4trace:configure.ac:26: -1- AC_SUBST([psdir], ['${docdir}'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([psdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^psdir$])
m4trace:configure.ac:26: -1- AC_SUBST([libdir], ['${exec_prefix}/lib'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([libdir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^libdir$])
m4trace:configure.ac:26: -1- AC_SUBST([localedir], ['${datarootdir}/locale'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([localedir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^localedir$])
m4trace:configure.ac:26: -1- AC_SUBST([mandir], ['${datarootdir}/man'])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([mandir])
m4trace:configure.ac:26: -1- m4_pattern_allow([^mandir$])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_NAME])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_NAME$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_NAME], [/* Define to the full name of this package. */
@%:@undef PACKAGE_NAME])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_TARNAME])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_TARNAME$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_TARNAME], [/* Define to the one symbol short name of this package. */
@%:@undef PACKAGE_TARNAME])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_VERSION])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_VERSION$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_VERSION], [/* Define to the version of this package. */
@%:@undef PACKAGE_VERSION])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_STRING])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_STRING$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_STRING], [/* Define to the full name and version of this package. */
@%:@undef PACKAGE_STRING])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_BUGREPORT])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_BUGREPORT$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_BUGREPORT], [/* Define to the address where bug reports for this package should be sent. */
@%:@undef PACKAGE_BUGREPORT])
m4trace:configure.ac:26: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_URL])
m4trace:configure.ac:26: -1- m4_pattern_allow([^PACKAGE_URL$])
m4trace:configure.ac:26: -1- AH_OUTPUT([PACKAGE_URL], [/* Define to the home page for this package. */
@%:@undef PACKAGE_URL])
m4trace:configure.ac:26: -1- AC_SUBST([DEFS])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([DEFS])
m4trace:configure.ac:26: -1- m4_pattern_allow([^DEFS$])
m4trace:configure.ac:26: -1- AC_SUBST([ECHO_C])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([ECHO_C])
m4trace:configure.ac:26: -1- m4_pattern_allow([^ECHO_C$])
m4trace:configure.ac:26: -1- AC_SUBST([ECHO_N])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([ECHO_N])
m4trace:configure.ac:26: -1- m4_pattern_allow([^ECHO_N$])
m4trace:configure.ac:26: -1- AC_SUBST([ECHO_T])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([ECHO_T])
m4trace:configure.ac:26: -1- m4_pattern_allow([^ECHO_T$])
m4trace:configure.ac:26: -1- AC_SUBST([LIBS])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([LIBS])
m4trace:configure.ac:26: -1- m4_pattern_allow([^LIBS$])
m4trace:configure.ac:26: -1- AC_SUBST([build_alias])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([build_alias])
m4trace:configure.ac:26: -1- m4_pattern_allow([^build_alias$])
m4trace:configure.ac:26: -1- AC_SUBST([host_alias])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([host_alias])
m4trace:configure.ac:26: -1- m4_pattern_allow([^host_alias$])
m4trace:configure.ac:26: -1- AC_SUBST([target_alias])
m4trace:configure.ac:26: -1- AC_SUBST_TRACE([target_alias])
m4trace:configure.ac:26: -1- m4_pattern_allow([^target_alias$])
m4trace:configure.ac:30: -1- AC_CONFIG_HEADERS([config.h])
m4trace:configure.ac:32: -1- m4_include([m4/hts_prog_cc_warnings.m4])
m4trace:configure.ac:33: -1- m4_include([m4/hts_hide_dynamic_syms.m4])
m4trace:configure.ac:42: -1- AH_OUTPUT([00001], [/* If you use configure, this file provides @%:@defines reflecting your
   configuration choices.  If you have not run configure, suitable
   conservative defaults will be used.

   Autoheader adds a number of items to this template file that are not
   used by HTSlib: STDC_HEADERS and most HAVE_*_H header file defines
   are immaterial, as we assume standard ISO C headers and facilities;
   the PACKAGE_* defines are unused and are overridden by the more
   accurate PACKAGE_VERSION as computed by the Makefile.  */])
m4trace:configure.ac:62: -1- AC_SUBST([CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CC$])
m4trace:configure.ac:62: -1- AC_SUBST([CFLAGS])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CFLAGS])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CFLAGS$])
m4trace:configure.ac:62: -1- AC_SUBST([LDFLAGS])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([LDFLAGS])
m4trace:configure.ac:62: -1- m4_pattern_allow([^LDFLAGS$])
m4trace:configure.ac:62: -1- AC_SUBST([LIBS])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([LIBS])
m4trace:configure.ac:62: -1- m4_pattern_allow([^LIBS$])
m4trace:configure.ac:62: -1- AC_SUBST([CPPFLAGS])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CPPFLAGS])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CPPFLAGS$])
m4trace:configure.ac:62: -1- AC_SUBST([CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CC$])
m4trace:configure.ac:62: -1- AC_SUBST([CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CC$])
m4trace:configure.ac:62: -1- AC_SUBST([CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CC$])
m4trace:configure.ac:62: -1- AC_SUBST([CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^CC$])
m4trace:configure.ac:62: -1- AC_SUBST([ac_ct_CC])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([ac_ct_CC])
m4trace:configure.ac:62: -1- m4_pattern_allow([^ac_ct_CC$])
m4trace:configure.ac:62: -1- AC_SUBST([EXEEXT], [$ac_cv_exeext])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([EXEEXT])
m4trace:configure.ac:62: -1- m4_pattern_allow([^EXEEXT$])
m4trace:configure.ac:62: -1- AC_SUBST([OBJEXT], [$ac_cv_objext])
m4trace:configure.ac:62: -1- AC_SUBST_TRACE([OBJEXT])
m4trace:configure.ac:62: -1- m4_pattern_allow([^OBJEXT$])
m4trace:configure.ac:63: -1- AC_SUBST([RANLIB])
m4trace:configure.ac:63: -1- AC_SUBST_TRACE([RANLIB])
m4trace:configure.ac:63: -1- m4_pattern_allow([^RANLIB$])
m4trace:configure.ac:66: -1- AC_SUBST([GREP])
m4trace:configure.ac:66: -1- AC_SUBST_TRACE([GREP])
m4trace:configure.ac:66: -1- m4_pattern_allow([^GREP$])
m4trace:configure.ac:74: -1- m4_pattern_forbid([^_?PKG_[A-Z_]+$])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG(_(PATH|LIBDIR|SYSROOT_DIR|ALLOW_SYSTEM_(CFLAGS|LIBS)))?$])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG_(DISABLE_UNINSTALLED|TOP_BUILD_DIR|DEBUG_SPEW)$])
m4trace:configure.ac:74: -1- AC_SUBST([PKG_CONFIG])
m4trace:configure.ac:74: -1- AC_SUBST_TRACE([PKG_CONFIG])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG$])
m4trace:configure.ac:74: -1- AC_SUBST([PKG_CONFIG_PATH])
m4trace:configure.ac:74: -1- AC_SUBST_TRACE([PKG_CONFIG_PATH])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG_PATH$])
m4trace:configure.ac:74: -1- AC_SUBST([PKG_CONFIG_LIBDIR])
m4trace:configure.ac:74: -1- AC_SUBST_TRACE([PKG_CONFIG_LIBDIR])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG_LIBDIR$])
m4trace:configure.ac:74: -1- AC_SUBST([PKG_CONFIG])
m4trace:configure.ac:74: -1- AC_SUBST_TRACE([PKG_CONFIG])
m4trace:configure.ac:74: -1- m4_pattern_allow([^PKG_CONFIG$])
m4trace:configure.ac:92: -1- AC_DEFINE_TRACE_LITERAL([_FILE_OFFSET_BITS])
m4trace:configure.ac:92: -1- m4_pattern_allow([^_FILE_OFFSET_BITS$])
m4trace:configure.ac:92: -1- AH_OUTPUT([_FILE_OFFSET_BITS], [/* Number of bits in a file offset, on hosts where this is settable. */
@%:@undef _FILE_OFFSET_BITS])
m4trace:configure.ac:92: -1- AC_DEFINE_TRACE_LITERAL([_LARGE_FILES])
m4trace:configure.ac:92: -1- m4_pattern_allow([^_LARGE_FILES$])
m4trace:configure.ac:92: -1- AH_OUTPUT([_LARGE_FILES], [/* Define for large files, on AIX-style hosts. */
@%:@undef _LARGE_FILES])
m4trace:configure.ac:92: -1- AH_OUTPUT([_DARWIN_USE_64_BIT_INODE], [/* Enable large inode numbers on Mac OS X 10.5.  */
#ifndef _DARWIN_USE_64_BIT_INODE
# define _DARWIN_USE_64_BIT_INODE 1
#endif])
m4trace:configure.ac:108: -1- AC_SUBST([enable_plugins])
m4trace:configure.ac:108: -1- AC_SUBST_TRACE([enable_plugins])
m4trace:configure.ac:108: -1- m4_pattern_allow([^enable_plugins$])
m4trace:configure.ac:122: -1- AC_SUBST([plugindir], [$with_plugin_dir])
m4trace:configure.ac:122: -1- AC_SUBST_TRACE([plugindir])
m4trace:configure.ac:122: -1- m4_pattern_allow([^plugindir$])
m4trace:configure.ac:132: -1- AC_SUBST([pluginpath], [$with_plugin_path])
m4trace:configure.ac:132: -1- AC_SUBST_TRACE([pluginpath])
m4trace:configure.ac:132: -1- m4_pattern_allow([^pluginpath$])
m4trace:configure.ac:168: -1- AC_SUBST([PLATFORM])
m4trace:configure.ac:168: -1- AC_SUBST_TRACE([PLATFORM])
m4trace:configure.ac:168: -1- m4_pattern_allow([^PLATFORM$])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_STDLIB_H], [/* Define to 1 if you have the <stdlib.h> header file. */
@%:@undef HAVE_STDLIB_H])
m4trace:configure.ac:175: -1- AC_SUBST([CPP])
m4trace:configure.ac:175: -1- AC_SUBST_TRACE([CPP])
m4trace:configure.ac:175: -1- m4_pattern_allow([^CPP$])
m4trace:configure.ac:175: -1- AC_SUBST([CPPFLAGS])
m4trace:configure.ac:175: -1- AC_SUBST_TRACE([CPPFLAGS])
m4trace:configure.ac:175: -1- m4_pattern_allow([^CPPFLAGS$])
m4trace:configure.ac:175: -1- AC_SUBST([CPP])
m4trace:configure.ac:175: -1- AC_SUBST_TRACE([CPP])
m4trace:configure.ac:175: -1- m4_pattern_allow([^CPP$])
m4trace:configure.ac:175: -1- AC_SUBST([EGREP])
m4trace:configure.ac:175: -1- AC_SUBST_TRACE([EGREP])
m4trace:configure.ac:175: -1- m4_pattern_allow([^EGREP$])
m4trace:configure.ac:175: -1- AC_DEFINE_TRACE_LITERAL([STDC_HEADERS])
m4trace:configure.ac:175: -1- m4_pattern_allow([^STDC_HEADERS$])
m4trace:configure.ac:175: -1- AH_OUTPUT([STDC_HEADERS], [/* Define to 1 if you have the ANSI C header files. */
@%:@undef STDC_HEADERS])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_SYS_TYPES_H], [/* Define to 1 if you have the <sys/types.h> header file. */
@%:@undef HAVE_SYS_TYPES_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_SYS_STAT_H], [/* Define to 1 if you have the <sys/stat.h> header file. */
@%:@undef HAVE_SYS_STAT_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_STDLIB_H], [/* Define to 1 if you have the <stdlib.h> header file. */
@%:@undef HAVE_STDLIB_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_STRING_H], [/* Define to 1 if you have the <string.h> header file. */
@%:@undef HAVE_STRING_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_MEMORY_H], [/* Define to 1 if you have the <memory.h> header file. */
@%:@undef HAVE_MEMORY_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_STRINGS_H], [/* Define to 1 if you have the <strings.h> header file. */
@%:@undef HAVE_STRINGS_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_INTTYPES_H], [/* Define to 1 if you have the <inttypes.h> header file. */
@%:@undef HAVE_INTTYPES_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_STDINT_H], [/* Define to 1 if you have the <stdint.h> header file. */
@%:@undef HAVE_STDINT_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_UNISTD_H], [/* Define to 1 if you have the <unistd.h> header file. */
@%:@undef HAVE_UNISTD_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_UNISTD_H], [/* Define to 1 if you have the <unistd.h> header file. */
@%:@undef HAVE_UNISTD_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_SYS_PARAM_H], [/* Define to 1 if you have the <sys/param.h> header file. */
@%:@undef HAVE_SYS_PARAM_H])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_GETPAGESIZE], [/* Define to 1 if you have the `getpagesize\' function. */
@%:@undef HAVE_GETPAGESIZE])
m4trace:configure.ac:175: -1- AC_DEFINE_TRACE_LITERAL([HAVE_GETPAGESIZE])
m4trace:configure.ac:175: -1- m4_pattern_allow([^HAVE_GETPAGESIZE$])
m4trace:configure.ac:175: -1- AC_DEFINE_TRACE_LITERAL([HAVE_MMAP])
m4trace:configure.ac:175: -1- m4_pattern_allow([^HAVE_MMAP$])
m4trace:configure.ac:175: -1- AH_OUTPUT([HAVE_MMAP], [/* Define to 1 if you have a working `mmap\' system call. */
@%:@undef HAVE_MMAP])
m4trace:configure.ac:176: -1- AH_OUTPUT([HAVE_GMTIME_R], [/* Define to 1 if you have the `gmtime_r\' function. */
@%:@undef HAVE_GMTIME_R])
m4trace:configure.ac:176: -1- AH_OUTPUT([HAVE_FSYNC], [/* Define to 1 if you have the `fsync\' function. */
@%:@undef HAVE_FSYNC])
m4trace:configure.ac:176: -1- AH_OUTPUT([HAVE_DRAND48], [/* Define to 1 if you have the `drand48\' function. */
@%:@undef HAVE_DRAND48])
m4trace:configure.ac:179: -1- AH_OUTPUT([HAVE_FDATASYNC], [/* Define to 1 if you have the `fdatasync\' function. */
@%:@undef HAVE_FDATASYNC])
m4trace:configure.ac:179: -1- AC_DEFINE_TRACE_LITERAL([HAVE_FDATASYNC])
m4trace:configure.ac:179: -1- m4_pattern_allow([^HAVE_FDATASYNC$])
m4trace:configure.ac:196: -1- AC_DEFINE_TRACE_LITERAL([ENABLE_PLUGINS])
m4trace:configure.ac:196: -1- m4_pattern_allow([^ENABLE_PLUGINS$])
m4trace:configure.ac:196: -1- AH_OUTPUT([ENABLE_PLUGINS], [/* Define if HTSlib should enable plugins. */
@%:@undef ENABLE_PLUGINS])
m4trace:configure.ac:197: -1- AC_SUBST([PLUGIN_EXT])
m4trace:configure.ac:197: -1- AC_SUBST_TRACE([PLUGIN_EXT])
m4trace:configure.ac:197: -1- m4_pattern_allow([^PLUGIN_EXT$])
m4trace:configure.ac:198: -1- AC_DEFINE_TRACE_LITERAL([PLUGIN_EXT])
m4trace:configure.ac:198: -1- m4_pattern_allow([^PLUGIN_EXT$])
m4trace:configure.ac:198: -1- AH_OUTPUT([PLUGIN_EXT], [/* Platform-dependent plugin filename extension. */
@%:@undef PLUGIN_EXT])
m4trace:configure.ac:211: -1- AH_OUTPUT([HAVE_LIBZ], [/* Define to 1 if you have the `z\' library (-lz). */
@%:@undef HAVE_LIBZ])
m4trace:configure.ac:211: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBZ])
m4trace:configure.ac:211: -1- m4_pattern_allow([^HAVE_LIBZ$])
m4trace:configure.ac:235: -1- AH_OUTPUT([HAVE_LIBBZ2], [/* Define to 1 if you have the `bz2\' library (-lbz2). */
@%:@undef HAVE_LIBBZ2])
m4trace:configure.ac:235: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBBZ2])
m4trace:configure.ac:235: -1- m4_pattern_allow([^HAVE_LIBBZ2$])
m4trace:configure.ac:262: -1- AH_OUTPUT([HAVE_LZMA_H], [/* Define to 1 if you have the <lzma.h> header file. */
@%:@undef HAVE_LZMA_H])
m4trace:configure.ac:262: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LZMA_H])
m4trace:configure.ac:262: -1- m4_pattern_allow([^HAVE_LZMA_H$])
m4trace:configure.ac:263: -1- AH_OUTPUT([HAVE_LIBLZMA], [/* Define to 1 if you have the `lzma\' library (-llzma). */
@%:@undef HAVE_LIBLZMA])
m4trace:configure.ac:263: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBLZMA])
m4trace:configure.ac:263: -1- m4_pattern_allow([^HAVE_LIBLZMA$])
m4trace:configure.ac:282: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBDEFLATE])
m4trace:configure.ac:282: -1- m4_pattern_allow([^HAVE_LIBDEFLATE$])
m4trace:configure.ac:282: -1- AH_OUTPUT([HAVE_LIBDEFLATE], [/* Define if libdeflate is available. */
@%:@undef HAVE_LIBDEFLATE])
m4trace:configure.ac:305: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBCURL])
m4trace:configure.ac:305: -1- m4_pattern_allow([^HAVE_LIBCURL$])
m4trace:configure.ac:305: -1- AH_OUTPUT([HAVE_LIBCURL], [/* Define if libcurl file access is enabled. */
@%:@undef HAVE_LIBCURL])
m4trace:configure.ac:332: -1- AC_SUBST([libcurl])
m4trace:configure.ac:332: -1- AC_SUBST_TRACE([libcurl])
m4trace:configure.ac:332: -1- m4_pattern_allow([^libcurl$])
m4trace:configure.ac:337: -1- AC_DEFINE_TRACE_LITERAL([ENABLE_GCS])
m4trace:configure.ac:337: -1- m4_pattern_allow([^ENABLE_GCS$])
m4trace:configure.ac:337: -1- AH_OUTPUT([ENABLE_GCS], [/* Define if HTSlib should enable GCS support. */
@%:@undef ENABLE_GCS])
m4trace:configure.ac:350: -1- AC_SUBST([gcs])
m4trace:configure.ac:350: -1- AC_SUBST_TRACE([gcs])
m4trace:configure.ac:350: -1- m4_pattern_allow([^gcs$])
m4trace:configure.ac:371: -1- AC_DEFINE_TRACE_LITERAL([HAVE_COMMONCRYPTO])
m4trace:configure.ac:371: -1- m4_pattern_allow([^HAVE_COMMONCRYPTO$])
m4trace:configure.ac:371: -1- AH_OUTPUT([HAVE_COMMONCRYPTO], [/* Define if you have the Common Crypto library. */
@%:@undef HAVE_COMMONCRYPTO])
m4trace:configure.ac:371: -1- AC_DEFINE_TRACE_LITERAL([HAVE_HMAC])
m4trace:configure.ac:371: -1- m4_pattern_allow([^HAVE_HMAC$])
m4trace:configure.ac:371: -1- AH_OUTPUT([HAVE_HMAC], [/* Define if you have libcrypto-style HMAC(). */
@%:@undef HAVE_HMAC])
m4trace:configure.ac:403: -1- AC_DEFINE_TRACE_LITERAL([_XOPEN_SOURCE])
m4trace:configure.ac:403: -1- m4_pattern_allow([^_XOPEN_SOURCE$])
m4trace:configure.ac:403: -1- AH_OUTPUT([_XOPEN_SOURCE], [/* Needed for PTHREAD_MUTEX_RECURSIVE */
@%:@undef _XOPEN_SOURCE])
m4trace:configure.ac:406: -1- AC_DEFINE_TRACE_LITERAL([ENABLE_S3])
m4trace:configure.ac:406: -1- m4_pattern_allow([^ENABLE_S3$])
m4trace:configure.ac:406: -1- AH_OUTPUT([ENABLE_S3], [/* Define if HTSlib should enable S3 support. */
@%:@undef ENABLE_S3])
m4trace:configure.ac:412: -1- AC_SUBST([s3])
m4trace:configure.ac:412: -1- AC_SUBST_TRACE([s3])
m4trace:configure.ac:412: -1- m4_pattern_allow([^s3$])
m4trace:configure.ac:413: -1- AC_SUBST([CRYPTO_LIBS])
m4trace:configure.ac:413: -1- AC_SUBST_TRACE([CRYPTO_LIBS])
m4trace:configure.ac:413: -1- m4_pattern_allow([^CRYPTO_LIBS$])
m4trace:configure.ac:415: -1- AC_SUBST([pc_requires])
m4trace:configure.ac:415: -1- AC_SUBST_TRACE([pc_requires])
m4trace:configure.ac:415: -1- m4_pattern_allow([^pc_requires$])
m4trace:configure.ac:416: -1- AC_SUBST([private_LIBS])
m4trace:configure.ac:416: -1- AC_SUBST_TRACE([private_LIBS])
m4trace:configure.ac:416: -1- m4_pattern_allow([^private_LIBS$])
m4trace:configure.ac:417: -1- AC_SUBST([static_LDFLAGS])
m4trace:configure.ac:417: -1- AC_SUBST_TRACE([static_LDFLAGS])
m4trace:configure.ac:417: -1- m4_pattern_allow([^static_LDFLAGS$])
m4trace:configure.ac:418: -1- AC_SUBST([static_LIBS])
m4trace:configure.ac:418: -1- AC_SUBST_TRACE([static_LIBS])
m4trace:configure.ac:418: -1- m4_pattern_allow([^static_LIBS$])
m4trace:configure.ac:420: -1- AC_CONFIG_FILES([config.mk htslib.pc.tmp:htslib.pc.in])
m4trace:configure.ac:421: -1- AC_SUBST([LIB@&t@OBJS], [$ac_libobjs])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([LIB@&t@OBJS])
m4trace:configure.ac:421: -1- m4_pattern_allow([^LIB@&t@OBJS$])
m4trace:configure.ac:421: -1- AC_SUBST([LTLIBOBJS], [$ac_ltlibobjs])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([LTLIBOBJS])
m4trace:configure.ac:421: -1- m4_pattern_allow([^LTLIBOBJS$])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([top_builddir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([top_build_prefix])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([srcdir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([abs_srcdir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([top_srcdir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([abs_top_srcdir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([builddir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([abs_builddir])
m4trace:configure.ac:421: -1- AC_SUBST_TRACE([abs_top_builddir])