############################################################################# # Makefile for building: libhmm2.so.1.0.0 # Generated by qmake (3.0) (Qt 5.5.1) # Project: hmm2.pro # Template: lib ############################################################################# MAKEFILE = Makefile.Release ####### Compiler, tools and options CC = gcc CXX = g++ DEFINES = -DU2_DISTRIBUTION_INFO=sources -DUGENE_VERSION=1.29.0 -DUGENE_VER_MAJOR=1 -DUGENE_VER_MINOR=29 -DUGENE_VER_PATCH=0 -DUGENE_X86 -DUGENE_DATA_DIR=\"/home/birch/BIRCH/local/pkg/ugene-1.29.0/share/ugene/data\" -DQT_DLL -DNDEBUG -DPLUGIN_ID=\"hmm2\" -DHMMER_BUILD_WITH_SSE2 -DQT_NO_DEBUG -DQT_WEBKIT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_SCRIPT_LIB -DQT_NETWORK_LIB -DQT_XML_LIB -DQT_CORE_LIB CFLAGS = -m64 -pipe -O2 -msse2 -D_REENTRANT -w -fPIC $(DEFINES) CXXFLAGS = -m64 -pipe -msse2 -O2 -D_REENTRANT -w -fPIC $(DEFINES) INCPATH = -I. -Isrc -I_tmp -I../../include -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtWebKit -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtScript -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtXml -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -I_tmp/moc/release -I_tmp/ui -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 QMAKE = /usr/lib/x86_64-linux-gnu/qt5/bin/qmake DEL_FILE = rm -f CHK_DIR_EXISTS= test -d MKDIR = mkdir -p COPY = cp -f COPY_FILE = cp -f COPY_DIR = cp -f -R INSTALL_FILE = install -m 644 -p INSTALL_PROGRAM = install -m 755 -p INSTALL_DIR = cp -f -R DEL_FILE = rm -f SYMLINK = ln -f -s DEL_DIR = rmdir MOVE = mv -f TAR = tar -cf COMPRESS = gzip -9f DISTNAME = hmm21.0.0 DISTDIR = /home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp/obj/release/hmm21.0.0 LINK = g++ LFLAGS = -m64 -Wl,-O1 -Wl,-rpath-link,/usr/lib/x86_64-linux-gnu -shared -Wl,-soname,libhmm2.so.1 LIBS = $(SUBLIBS) -L/usr/X11R6/lib64 -L../../_release -lU2Core -lU2Algorithm -lU2Formats -lU2Gui -lU2View -lU2Test -lU2Lang -lU2Designer -lQt5WebKit -lQt5Svg -lQt5Widgets -lQt5Gui -lQt5Script -lQt5Network -lQt5Xml -lQt5Core -lpthread -lGL AR = ar cqs RANLIB = SED = sed STRIP = strip ####### Output directory OBJECTS_DIR = _tmp/obj/release/ ####### Files SOURCES = src/HMMIO.cpp \ src/HMMIOWorker.cpp \ src/TaskLocalStorage.cpp \ src/uHMMPlugin.cpp \ src/hmmer2/aligneval.cpp \ src/hmmer2/alphabet.cpp \ src/hmmer2/altivec_algorithms.cpp \ src/hmmer2/checksum.cpp \ src/hmmer2/cluster.cpp \ src/hmmer2/core_algorithms.cpp \ src/hmmer2/fast_algorithms.cpp \ src/hmmer2/histogram.cpp \ src/hmmer2/iupac.cpp \ src/hmmer2/masks.cpp \ src/hmmer2/mathsupport.cpp \ src/hmmer2/modelmakers.cpp \ src/hmmer2/msa.cpp \ src/hmmer2/plan7.cpp \ src/hmmer2/prior.cpp \ src/hmmer2/sqerror.cpp \ src/hmmer2/sre_math.cpp \ src/hmmer2/sre_random.cpp \ src/hmmer2/sre_string.cpp \ src/hmmer2/tophits.cpp \ src/hmmer2/trace.cpp \ src/hmmer2/vectorops.cpp \ src/hmmer2/weight.cpp \ src/u_build/HMMBuildDialogController.cpp \ src/u_build/HMMBuildWorker.cpp \ src/u_build/uhmmbuild.cpp \ src/u_calibrate/HMMCalibrateDialogController.cpp \ src/u_calibrate/HMMCalibrateTask.cpp \ src/u_calibrate/uhmmcalibrate.cpp \ src/u_search/hmmer_ppu.cpp \ src/u_search/HMMSearchDialogController.cpp \ src/u_search/HMMSearchTask.cpp \ src/u_search/HMMSearchWorker.cpp \ src/u_search/HMMSearchQDActor.cpp \ src/u_search/uhmmsearch.cpp \ src/u_search/uhmmsearch_cell.cpp \ src/u_search/uhmmsearch_opt.cpp \ src/u_search/uhmmsearch_sse.cpp \ src/u_spu/hmmer_spu.c \ src/u_spu/hmmercell_spu.c \ src/u_tests/uhmmerTests.cpp _tmp/rcc/qrc_hmm2.cpp \ _tmp/moc/release/moc_HMMIO.cpp \ _tmp/moc/release/moc_HMMIOWorker.cpp \ _tmp/moc/release/moc_uHMMPlugin.cpp \ _tmp/moc/release/moc_HMMBuildDialogController.cpp \ _tmp/moc/release/moc_HMMBuildWorker.cpp \ _tmp/moc/release/moc_uhmmbuild.cpp \ _tmp/moc/release/moc_HMMCalibrateDialogController.cpp \ _tmp/moc/release/moc_HMMCalibrateTask.cpp \ _tmp/moc/release/moc_HMMSearchDialogController.cpp \ _tmp/moc/release/moc_HMMSearchTask.cpp \ _tmp/moc/release/moc_HMMSearchWorker.cpp \ _tmp/moc/release/moc_HMMSearchQDActor.cpp \ _tmp/moc/release/moc_uhmmsearch.cpp \ _tmp/moc/release/moc_uhmmerTests.cpp OBJECTS = _tmp/obj/release/HMMIO.o \ _tmp/obj/release/HMMIOWorker.o \ _tmp/obj/release/TaskLocalStorage.o \ _tmp/obj/release/uHMMPlugin.o \ _tmp/obj/release/aligneval.o \ _tmp/obj/release/alphabet.o \ _tmp/obj/release/altivec_algorithms.o \ _tmp/obj/release/checksum.o \ _tmp/obj/release/cluster.o \ _tmp/obj/release/core_algorithms.o \ _tmp/obj/release/fast_algorithms.o \ _tmp/obj/release/histogram.o \ _tmp/obj/release/iupac.o \ _tmp/obj/release/masks.o \ _tmp/obj/release/mathsupport.o \ _tmp/obj/release/modelmakers.o \ _tmp/obj/release/msa.o \ _tmp/obj/release/plan7.o \ _tmp/obj/release/prior.o \ _tmp/obj/release/sqerror.o \ _tmp/obj/release/sre_math.o \ _tmp/obj/release/sre_random.o \ _tmp/obj/release/sre_string.o \ _tmp/obj/release/tophits.o \ _tmp/obj/release/trace.o \ _tmp/obj/release/vectorops.o \ _tmp/obj/release/weight.o \ _tmp/obj/release/HMMBuildDialogController.o \ _tmp/obj/release/HMMBuildWorker.o \ _tmp/obj/release/uhmmbuild.o \ _tmp/obj/release/HMMCalibrateDialogController.o \ _tmp/obj/release/HMMCalibrateTask.o \ _tmp/obj/release/uhmmcalibrate.o \ _tmp/obj/release/hmmer_ppu.o \ _tmp/obj/release/HMMSearchDialogController.o \ _tmp/obj/release/HMMSearchTask.o \ _tmp/obj/release/HMMSearchWorker.o \ _tmp/obj/release/HMMSearchQDActor.o \ _tmp/obj/release/uhmmsearch.o \ _tmp/obj/release/uhmmsearch_cell.o \ _tmp/obj/release/uhmmsearch_opt.o \ _tmp/obj/release/uhmmsearch_sse.o \ _tmp/obj/release/hmmer_spu.o \ _tmp/obj/release/hmmercell_spu.o \ _tmp/obj/release/uhmmerTests.o \ _tmp/obj/release/qrc_hmm2.o \ _tmp/obj/release/moc_HMMIO.o \ _tmp/obj/release/moc_HMMIOWorker.o \ _tmp/obj/release/moc_uHMMPlugin.o \ _tmp/obj/release/moc_HMMBuildDialogController.o \ _tmp/obj/release/moc_HMMBuildWorker.o \ _tmp/obj/release/moc_uhmmbuild.o \ _tmp/obj/release/moc_HMMCalibrateDialogController.o \ _tmp/obj/release/moc_HMMCalibrateTask.o \ _tmp/obj/release/moc_HMMSearchDialogController.o \ _tmp/obj/release/moc_HMMSearchTask.o \ _tmp/obj/release/moc_HMMSearchWorker.o \ _tmp/obj/release/moc_HMMSearchQDActor.o \ _tmp/obj/release/moc_uhmmsearch.o \ _tmp/obj/release/moc_uhmmerTests.o DIST = /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_pre.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/unix.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/linux.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/sanitize.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base-unix.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-base.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-unix.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/qconfig.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_bootstrap_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfs_device_lib_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_platformsupport_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_qml.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_qmltest.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_quick.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_quickwidgets.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_script.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_scripttools.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_svg.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_webkit.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_webkitwidgets.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xcb_qpa_lib_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml_private.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_functions.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_config.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64/qmake.conf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_post.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exclusive_builds.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_pre.prf \ ../../ugene_version.pri \ ../../ugene_globals.pri \ ../../ugene_lib_common.pri \ ../../ugene_plugin_descriptor.pri \ ../../ugene_plugin_common.pri \ hmm2.pri \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resolve_config.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exclusive_builds_post.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_post.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/build_pass.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/thread.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resources.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/moc.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/opengl.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/uic.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/warn_off.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/testcase_targets.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exceptions.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/yacc.prf \ /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/lex.prf \ hmm2.pro src/HMMIO.h \ src/HMMIOWorker.h \ src/TaskLocalStorage.h \ src/uHMMPlugin.h \ src/hmmer2/config.h \ src/hmmer2/funcs.h \ src/hmmer2/structs.h \ src/u_build/HMMBuildDialogController.h \ src/u_build/HMMBuildWorker.h \ src/u_build/uhmmbuild.h \ src/u_calibrate/HMMCalibrateDialogController.h \ src/u_calibrate/HMMCalibrateTask.h \ src/u_calibrate/uhmmcalibrate.h \ src/u_search/hmmer_ppu.h \ src/u_search/HMMSearchDialogController.h \ src/u_search/HMMSearchTask.h \ src/u_search/HMMSearchWorker.h \ src/u_search/HMMSearchQDActor.h \ src/u_search/uhmmsearch.h \ src/u_search/uhmmsearch_cell.h \ src/u_search/uhmmsearch_opt.h \ src/u_search/uhmmsearch_sse.h \ src/u_spu/hmmer_spu.h \ src/u_tests/uhmmerTests.h src/HMMIO.cpp \ src/HMMIOWorker.cpp \ src/TaskLocalStorage.cpp \ src/uHMMPlugin.cpp \ src/hmmer2/aligneval.cpp \ src/hmmer2/alphabet.cpp \ src/hmmer2/altivec_algorithms.cpp \ src/hmmer2/checksum.cpp \ src/hmmer2/cluster.cpp \ src/hmmer2/core_algorithms.cpp \ src/hmmer2/fast_algorithms.cpp \ src/hmmer2/histogram.cpp \ src/hmmer2/iupac.cpp \ src/hmmer2/masks.cpp \ src/hmmer2/mathsupport.cpp \ src/hmmer2/modelmakers.cpp \ src/hmmer2/msa.cpp \ src/hmmer2/plan7.cpp \ src/hmmer2/prior.cpp \ src/hmmer2/sqerror.cpp \ src/hmmer2/sre_math.cpp \ src/hmmer2/sre_random.cpp \ src/hmmer2/sre_string.cpp \ src/hmmer2/tophits.cpp \ src/hmmer2/trace.cpp \ src/hmmer2/vectorops.cpp \ src/hmmer2/weight.cpp \ src/u_build/HMMBuildDialogController.cpp \ src/u_build/HMMBuildWorker.cpp \ src/u_build/uhmmbuild.cpp \ src/u_calibrate/HMMCalibrateDialogController.cpp \ src/u_calibrate/HMMCalibrateTask.cpp \ src/u_calibrate/uhmmcalibrate.cpp \ src/u_search/hmmer_ppu.cpp \ src/u_search/HMMSearchDialogController.cpp \ src/u_search/HMMSearchTask.cpp \ src/u_search/HMMSearchWorker.cpp \ src/u_search/HMMSearchQDActor.cpp \ src/u_search/uhmmsearch.cpp \ src/u_search/uhmmsearch_cell.cpp \ src/u_search/uhmmsearch_opt.cpp \ src/u_search/uhmmsearch_sse.cpp \ src/u_spu/hmmer_spu.c \ src/u_spu/hmmercell_spu.c \ src/u_tests/uhmmerTests.cpp QMAKE_TARGET = hmm2 DESTDIR = ../../_release/plugins/#avoid trailing-slash linebreak TARGET = libhmm2.so.1.0.0 TARGETA = ../../_release/plugins/libhmm2.a TARGET0 = libhmm2.so TARGETD = libhmm2.so.1.0.0 TARGET1 = libhmm2.so.1 TARGET2 = libhmm2.so.1.0 first: all ####### Implicit rules .SUFFIXES: .o .c .cpp .cc .cxx .C .cpp.o: $(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<" .cc.o: $(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<" .cxx.o: $(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<" .C.o: $(CXX) -c $(CXXFLAGS) $(INCPATH) -o "$@" "$<" .c.o: $(CC) -c $(CFLAGS) $(INCPATH) -o "$@" "$<" ####### Build rules ../../_release/plugins/$(TARGET): _tmp/ui/ui_HMMBuildDialog.h _tmp/ui/ui_HMMCalibrateDialog.h _tmp/ui/ui_HMMSearchDialog.h $(OBJECTS) $(SUBLIBS) $(OBJCOMP) @test -d ../../_release/plugins/ || mkdir -p ../../_release/plugins/ -$(DEL_FILE) $(TARGET) $(TARGET0) $(TARGET1) $(TARGET2) $(LINK) $(LFLAGS) -o $(TARGET) $(OBJECTS) $(LIBS) $(OBJCOMP) -ln -s $(TARGET) $(TARGET0) -ln -s $(TARGET) $(TARGET1) -ln -s $(TARGET) $(TARGET2) -$(DEL_FILE) ../../_release/plugins/$(TARGET) -$(MOVE) $(TARGET) ../../_release/plugins/ -$(DEL_FILE) ../../_release/plugins/$(TARGET0) -$(DEL_FILE) ../../_release/plugins/$(TARGET1) -$(DEL_FILE) ../../_release/plugins/$(TARGET2) -$(MOVE) $(TARGET0) ../../_release/plugins/ -$(MOVE) $(TARGET1) ../../_release/plugins/ -$(MOVE) $(TARGET2) ../../_release/plugins/ staticlib: $(TARGETA) $(TARGETA): _tmp/ui/ui_HMMBuildDialog.h _tmp/ui/ui_HMMCalibrateDialog.h _tmp/ui/ui_HMMSearchDialog.h $(OBJECTS) $(OBJCOMP) -$(DEL_FILE) $(TARGETA) $(AR) $(TARGETA) $(OBJECTS) qmake: FORCE @$(QMAKE) INSTALL_PREFIX=/home/birch/BIRCH/local/pkg/ugene-1.29.0 -o Makefile.Release hmm2.pro qmake_all: FORCE all: Makefile.Release ../../_release/plugins/$(TARGET) dist: distdir FORCE (cd `dirname $(DISTDIR)` && $(TAR) $(DISTNAME).tar $(DISTNAME) && $(COMPRESS) $(DISTNAME).tar) && $(MOVE) `dirname $(DISTDIR)`/$(DISTNAME).tar.gz . && $(DEL_FILE) -r $(DISTDIR) distdir: FORCE @test -d $(DISTDIR) || mkdir -p $(DISTDIR) $(COPY_FILE) --parents $(DIST) $(DISTDIR)/ $(COPY_FILE) --parents hmm2.qrc $(DISTDIR)/ $(COPY_FILE) --parents src/HMMIO.h src/HMMIOWorker.h src/TaskLocalStorage.h src/uHMMPlugin.h src/hmmer2/config.h src/hmmer2/funcs.h src/hmmer2/structs.h src/u_build/HMMBuildDialogController.h src/u_build/HMMBuildWorker.h src/u_build/uhmmbuild.h src/u_calibrate/HMMCalibrateDialogController.h src/u_calibrate/HMMCalibrateTask.h src/u_calibrate/uhmmcalibrate.h src/u_search/hmmer_ppu.h src/u_search/HMMSearchDialogController.h src/u_search/HMMSearchTask.h src/u_search/HMMSearchWorker.h src/u_search/HMMSearchQDActor.h src/u_search/uhmmsearch.h src/u_search/uhmmsearch_cell.h src/u_search/uhmmsearch_opt.h src/u_search/uhmmsearch_sse.h src/u_spu/hmmer_spu.h src/u_tests/uhmmerTests.h $(DISTDIR)/ $(COPY_FILE) --parents src/HMMIO.cpp src/HMMIOWorker.cpp src/TaskLocalStorage.cpp src/uHMMPlugin.cpp src/hmmer2/aligneval.cpp src/hmmer2/alphabet.cpp src/hmmer2/altivec_algorithms.cpp src/hmmer2/checksum.cpp src/hmmer2/cluster.cpp src/hmmer2/core_algorithms.cpp src/hmmer2/fast_algorithms.cpp src/hmmer2/histogram.cpp src/hmmer2/iupac.cpp src/hmmer2/masks.cpp src/hmmer2/mathsupport.cpp src/hmmer2/modelmakers.cpp src/hmmer2/msa.cpp src/hmmer2/plan7.cpp src/hmmer2/prior.cpp src/hmmer2/sqerror.cpp src/hmmer2/sre_math.cpp src/hmmer2/sre_random.cpp src/hmmer2/sre_string.cpp src/hmmer2/tophits.cpp src/hmmer2/trace.cpp src/hmmer2/vectorops.cpp src/hmmer2/weight.cpp src/u_build/HMMBuildDialogController.cpp src/u_build/HMMBuildWorker.cpp src/u_build/uhmmbuild.cpp src/u_calibrate/HMMCalibrateDialogController.cpp src/u_calibrate/HMMCalibrateTask.cpp src/u_calibrate/uhmmcalibrate.cpp src/u_search/hmmer_ppu.cpp src/u_search/HMMSearchDialogController.cpp src/u_search/HMMSearchTask.cpp src/u_search/HMMSearchWorker.cpp src/u_search/HMMSearchQDActor.cpp src/u_search/uhmmsearch.cpp src/u_search/uhmmsearch_cell.cpp src/u_search/uhmmsearch_opt.cpp src/u_search/uhmmsearch_sse.cpp src/u_spu/hmmer_spu.c src/u_spu/hmmercell_spu.c src/u_tests/uhmmerTests.cpp $(DISTDIR)/ $(COPY_FILE) --parents src/u_build/HMMBuildDialog.ui src/u_calibrate/HMMCalibrateDialog.ui src/u_search/HMMSearchDialog.ui $(DISTDIR)/ $(COPY_FILE) --parents transl/english.ts transl/russian.ts $(DISTDIR)/ clean: compiler_clean -$(DEL_FILE) $(OBJECTS) -$(DEL_FILE) *~ core *.core distclean: clean -$(DEL_FILE) ../../_release/plugins/$(TARGET) -$(DEL_FILE) ../../_release/plugins/$(TARGET0) ../../_release/plugins/$(TARGET1) ../../_release/plugins/$(TARGET2) $(TARGETA) -$(DEL_FILE) Makefile.Release ####### Sub-libraries mocclean: compiler_moc_header_clean compiler_moc_source_clean mocables: compiler_moc_header_make_all compiler_moc_source_make_all check: first compiler_rcc_make_all: _tmp/rcc/qrc_hmm2.cpp compiler_rcc_clean: -$(DEL_FILE) _tmp/rcc/qrc_hmm2.cpp _tmp/rcc/qrc_hmm2.cpp: hmm2.qrc \ images/hmmer_16.png \ images/hmmer_64.png \ images/hmmer_32.png /usr/lib/x86_64-linux-gnu/qt5/bin/rcc -name hmm2 hmm2.qrc -o _tmp/rcc/qrc_hmm2.cpp compiler_moc_header_make_all: _tmp/moc/release/moc_HMMIO.cpp _tmp/moc/release/moc_HMMIOWorker.cpp _tmp/moc/release/moc_uHMMPlugin.cpp _tmp/moc/release/moc_HMMBuildDialogController.cpp _tmp/moc/release/moc_HMMBuildWorker.cpp _tmp/moc/release/moc_uhmmbuild.cpp _tmp/moc/release/moc_HMMCalibrateDialogController.cpp _tmp/moc/release/moc_HMMCalibrateTask.cpp _tmp/moc/release/moc_HMMSearchDialogController.cpp _tmp/moc/release/moc_HMMSearchTask.cpp _tmp/moc/release/moc_HMMSearchWorker.cpp _tmp/moc/release/moc_HMMSearchQDActor.cpp _tmp/moc/release/moc_uhmmsearch.cpp _tmp/moc/release/moc_uhmmerTests.cpp compiler_moc_header_clean: -$(DEL_FILE) _tmp/moc/release/moc_HMMIO.cpp _tmp/moc/release/moc_HMMIOWorker.cpp _tmp/moc/release/moc_uHMMPlugin.cpp _tmp/moc/release/moc_HMMBuildDialogController.cpp _tmp/moc/release/moc_HMMBuildWorker.cpp _tmp/moc/release/moc_uhmmbuild.cpp _tmp/moc/release/moc_HMMCalibrateDialogController.cpp _tmp/moc/release/moc_HMMCalibrateTask.cpp _tmp/moc/release/moc_HMMSearchDialogController.cpp _tmp/moc/release/moc_HMMSearchTask.cpp _tmp/moc/release/moc_HMMSearchWorker.cpp _tmp/moc/release/moc_HMMSearchQDActor.cpp _tmp/moc/release/moc_uhmmsearch.cpp _tmp/moc/release/moc_uhmmerTests.cpp _tmp/moc/release/moc_HMMIO.cpp: ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/HMMIO.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/HMMIO.h -o _tmp/moc/release/moc_HMMIO.cpp _tmp/moc/release/moc_HMMIOWorker.cpp: ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ src/hmmer2/structs.h \ src/hmmer2/config.h \ src/HMMIOWorker.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/HMMIOWorker.h -o _tmp/moc/release/moc_HMMIOWorker.cpp _tmp/moc/release/moc_uHMMPlugin.cpp: ../../include/U2Core/PluginModel.h \ ../../corelibs/U2Core/src/globals/PluginModel.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Gui/ObjectViewModel.h \ ../../corelibs/U2Gui/src/ObjectViewModel.h \ ../../include/U2Core/SelectionModel.h \ ../../corelibs/U2Core/src/selection/SelectionModel.h \ ../../corelibs/U2Gui/src/MainWindow.h \ ../../include/U2Core/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceModel.h \ ../../corelibs/U2Gui/src/NotificationsTypes.h \ src/uHMMPlugin.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/uHMMPlugin.h -o _tmp/moc/release/moc_uHMMPlugin.cpp _tmp/moc/release/moc_HMMBuildDialogController.cpp: _tmp/ui/ui_HMMBuildDialog.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ src/u_build/uhmmbuild.h \ src/u_build/HMMBuildDialogController.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_build/HMMBuildDialogController.h -o _tmp/moc/release/moc_HMMBuildDialogController.cpp _tmp/moc/release/moc_HMMBuildWorker.cpp: ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ src/u_build/uhmmbuild.h \ src/u_calibrate/uhmmcalibrate.h \ src/u_build/HMMBuildWorker.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_build/HMMBuildWorker.h -o _tmp/moc/release/moc_HMMBuildWorker.cpp _tmp/moc/release/moc_uhmmbuild.cpp: src/u_build/uhmmbuild.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_build/uhmmbuild.h -o _tmp/moc/release/moc_uhmmbuild.cpp _tmp/moc/release/moc_HMMCalibrateDialogController.cpp: src/u_calibrate/uhmmcalibrate.h \ _tmp/ui/ui_HMMCalibrateDialog.h \ src/u_calibrate/HMMCalibrateDialogController.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_calibrate/HMMCalibrateDialogController.h -o _tmp/moc/release/moc_HMMCalibrateDialogController.cpp _tmp/moc/release/moc_HMMCalibrateTask.cpp: src/u_calibrate/uhmmcalibrate.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/u_calibrate/HMMCalibrateTask.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_calibrate/HMMCalibrateTask.h -o _tmp/moc/release/moc_HMMCalibrateTask.cpp _tmp/moc/release/moc_HMMSearchDialogController.cpp: src/u_search/uhmmsearch.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ _tmp/ui/ui_HMMSearchDialog.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ src/u_search/HMMSearchDialogController.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_search/HMMSearchDialogController.h -o _tmp/moc/release/moc_HMMSearchDialogController.cpp _tmp/moc/release/moc_HMMSearchTask.cpp: src/u_search/uhmmsearch.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ src/u_search/HMMSearchTask.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_search/HMMSearchTask.h -o _tmp/moc/release/moc_HMMSearchTask.cpp _tmp/moc/release/moc_HMMSearchWorker.cpp: ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ src/u_search/uhmmsearch.h \ src/u_search/HMMSearchWorker.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_search/HMMSearchWorker.h -o _tmp/moc/release/moc_HMMSearchWorker.cpp _tmp/moc/release/moc_HMMSearchQDActor.cpp: ../../include/U2Lang/QDScheme.h \ ../../corelibs/U2Lang/src/model/QDScheme.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/GObjectTypes.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/QueryDesignerRegistry.h \ ../../corelibs/U2Lang/src/model/QueryDesignerRegistry.h \ src/u_search/HMMSearchQDActor.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_search/HMMSearchQDActor.h -o _tmp/moc/release/moc_HMMSearchQDActor.cpp _tmp/moc/release/moc_uhmmsearch.cpp: ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ src/u_search/uhmmsearch.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_search/uhmmsearch.h -o _tmp/moc/release/moc_uhmmsearch.cpp _tmp/moc/release/moc_uhmmerTests.cpp: ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Test/XMLTestUtils.h \ ../../corelibs/U2Test/src/xmltest/XMLTestUtils.h \ ../../include/U2Test/GTest.h \ ../../corelibs/U2Test/src/GTest.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../corelibs/U2Test/src/xmltest/XMLTestFormat.h \ src/u_tests/uhmmerTests.h /usr/lib/x86_64-linux-gnu/qt5/bin/moc $(DEFINES) -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2 -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/src -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/plugins_3rdparty/hmm2/_tmp -I/home/birch/BIRCH/local/pkg/ugene-1.29.0/src/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWebKit -I/usr/include/x86_64-linux-gnu/qt5/QtSvg -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtScript -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/5 -I/usr/include/x86_64-linux-gnu/c++/5 -I/usr/include/c++/5/backward -I/usr/lib/gcc/x86_64-linux-gnu/5/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/5/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include src/u_tests/uhmmerTests.h -o _tmp/moc/release/moc_uhmmerTests.cpp compiler_moc_source_make_all: compiler_moc_source_clean: compiler_uic_make_all: _tmp/ui/ui_HMMBuildDialog.h _tmp/ui/ui_HMMCalibrateDialog.h _tmp/ui/ui_HMMSearchDialog.h compiler_uic_clean: -$(DEL_FILE) _tmp/ui/ui_HMMBuildDialog.h _tmp/ui/ui_HMMCalibrateDialog.h _tmp/ui/ui_HMMSearchDialog.h _tmp/ui/ui_HMMBuildDialog.h: src/u_build/HMMBuildDialog.ui /usr/lib/x86_64-linux-gnu/qt5/bin/uic src/u_build/HMMBuildDialog.ui -o _tmp/ui/ui_HMMBuildDialog.h _tmp/ui/ui_HMMCalibrateDialog.h: src/u_calibrate/HMMCalibrateDialog.ui /usr/lib/x86_64-linux-gnu/qt5/bin/uic src/u_calibrate/HMMCalibrateDialog.ui -o _tmp/ui/ui_HMMCalibrateDialog.h _tmp/ui/ui_HMMSearchDialog.h: src/u_search/HMMSearchDialog.ui /usr/lib/x86_64-linux-gnu/qt5/bin/uic src/u_search/HMMSearchDialog.ui -o _tmp/ui/ui_HMMSearchDialog.h compiler_yacc_decl_make_all: compiler_yacc_decl_clean: compiler_yacc_impl_make_all: compiler_yacc_impl_clean: compiler_lex_make_all: compiler_lex_clean: compiler_clean: compiler_rcc_clean compiler_moc_header_clean compiler_uic_clean ####### Compile _tmp/obj/release/HMMIO.o: src/HMMIO.cpp src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/TaskLocalStorage.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/IOAdapterUtils.h \ ../../corelibs/U2Core/src/util/IOAdapterUtils.h \ ../../include/U2Core/L10n.h \ ../../corelibs/U2Core/src/globals/L10n.h \ ../../include/U2Core/GUrlUtils.h \ ../../corelibs/U2Core/src/util/GUrlUtils.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Core/Settings.h \ ../../corelibs/U2Core/src/globals/Settings.h \ ../../include/U2Core/TextUtils.h \ ../../corelibs/U2Core/src/util/TextUtils.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Gui/DialogUtils.h \ ../../corelibs/U2Gui/src/util/DialogUtils.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMIO.o src/HMMIO.cpp _tmp/obj/release/HMMIOWorker.o: src/HMMIOWorker.cpp src/HMMIOWorker.h \ ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ src/hmmer2/structs.h \ src/hmmer2/config.h \ ../../include/U2Lang/WorkflowEnv.h \ ../../corelibs/U2Lang/src/model/WorkflowEnv.h \ ../../include/U2Lang/ExternalToolCfg.h \ ../../corelibs/U2Lang/src/model/ExternalToolCfg.h \ ../../include/U2Lang/SchemaActorsRegistry.h \ ../../corelibs/U2Lang/src/model/SchemaActorsRegistry.h \ ../../include/U2Lang/ActorPrototypeRegistry.h \ ../../corelibs/U2Lang/src/model/ActorPrototypeRegistry.h \ ../../include/U2Designer/DelegateEditors.h \ ../../corelibs/U2Designer/src/DelegateEditors.h \ ../../include/U2Designer/URLLineEdit.h \ ../../corelibs/U2Designer/src/support/URLLineEdit.h \ ../../corelibs/U2Designer/src/PropertyWidget.h \ ../../include/U2Lang/CoreLibConstants.h \ ../../corelibs/U2Lang/src/support/CoreLibConstants.h \ ../../include/U2Lang/BaseTypes.h \ ../../corelibs/U2Lang/src/library/BaseTypes.h \ ../../include/U2Lang/BaseSlots.h \ ../../corelibs/U2Lang/src/library/BaseSlots.h \ ../../include/U2Lang/BaseAttributes.h \ ../../corelibs/U2Lang/src/library/BaseAttributes.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/GUrlUtils.h \ ../../corelibs/U2Core/src/util/GUrlUtils.h \ ../../include/U2Core/FailTask.h \ ../../corelibs/U2Core/src/tasks/FailTask.h \ ../../include/U2Core/TaskSignalMapper.h \ ../../corelibs/U2Core/src/tasks/TaskSignalMapper.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ src/u_search/HMMSearchDialogController.h \ src/u_search/uhmmsearch.h \ _tmp/ui/ui_HMMSearchDialog.h \ src/u_build/HMMBuildWorker.h \ src/u_build/uhmmbuild.h \ src/u_calibrate/uhmmcalibrate.h \ src/u_search/HMMSearchWorker.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMIOWorker.o src/HMMIOWorker.cpp _tmp/obj/release/TaskLocalStorage.o: src/TaskLocalStorage.cpp src/TaskLocalStorage.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/TaskLocalStorage.o src/TaskLocalStorage.cpp _tmp/obj/release/uHMMPlugin.o: src/uHMMPlugin.cpp ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/AppResources.h \ ../../corelibs/U2Core/src/globals/AppResources.h \ ../../include/U2Core/global.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/GAutoDeleteList.h \ ../../corelibs/U2Core/src/util/GAutoDeleteList.h \ ../../include/U2Core/GObjectSelection.h \ ../../corelibs/U2Core/src/selection/GObjectSelection.h \ ../../corelibs/U2Core/src/selection/SelectionTypes.h \ ../../include/U2Core/SelectionModel.h \ ../../corelibs/U2Core/src/selection/SelectionModel.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/L10n.h \ ../../corelibs/U2Core/src/globals/L10n.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/U2OpStatusUtils.h \ ../../corelibs/U2Core/src/util/U2OpStatusUtils.h \ ../../include/U2Gui/GUIUtils.h \ ../../corelibs/U2Gui/src/util/GUIUtils.h \ ../../corelibs/U2Gui/src/util/U2FileDialog.h \ ../../include/U2Gui/MainWindow.h \ ../../corelibs/U2Gui/src/MainWindow.h \ ../../include/U2Core/PluginModel.h \ ../../corelibs/U2Core/src/globals/PluginModel.h \ ../../include/U2Core/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceModel.h \ ../../corelibs/U2Gui/src/NotificationsTypes.h \ ../../include/U2Gui/ObjectViewModel.h \ ../../corelibs/U2Gui/src/ObjectViewModel.h \ ../../include/U2Gui/ProjectView.h \ ../../corelibs/U2Gui/src/ProjectView.h \ ../../include/U2Gui/ToolsMenu.h \ ../../corelibs/U2Gui/src/ToolsMenu.h \ ../../include/U2Core/QObjectScopedPointer.h \ ../../corelibs/U2Core/src/util/QObjectScopedPointer.h \ ../../include/U2Test/GTestFrameworkComponents.h \ ../../corelibs/U2Test/src/GTestFrameworkComponents.h \ ../../corelibs/U2Test/src/GTest.h \ ../../include/U2View/ADVConstants.h \ ../../corelibs/U2View/src/ov_sequence/ADVConstants.h \ ../../include/U2View/ADVSequenceObjectContext.h \ ../../corelibs/U2View/src/ov_sequence/ADVSequenceObjectContext.h \ ../../corelibs/U2View/src/ov_sequence/SequenceObjectContext.h \ ../../include/U2Core/AnnotationTableObject.h \ ../../corelibs/U2Core/src/gobjects/AnnotationTableObject.h \ ../../include/U2Core/Annotation.h \ 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../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/FailTask.h \ ../../corelibs/U2Core/src/tasks/FailTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ 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../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/GObjectTypes.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Designer/src/PropertyWidget.h \ ../../include/U2Lang/ActorPrototypeRegistry.h \ ../../corelibs/U2Lang/src/model/ActorPrototypeRegistry.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/BaseActorCategories.h \ ../../corelibs/U2Lang/src/library/BaseActorCategories.h \ ../../include/U2Lang/BasePorts.h \ ../../corelibs/U2Lang/src/library/BasePorts.h \ ../../include/U2Lang/BaseSlots.h \ ../../corelibs/U2Lang/src/library/BaseSlots.h \ ../../include/U2Lang/BaseTypes.h \ ../../corelibs/U2Lang/src/library/BaseTypes.h \ ../../include/U2Lang/CoreLibConstants.h \ ../../corelibs/U2Lang/src/support/CoreLibConstants.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/WorkflowEnv.h \ ../../corelibs/U2Lang/src/model/WorkflowEnv.h \ ../../include/U2Lang/ExternalToolCfg.h \ ../../corelibs/U2Lang/src/model/ExternalToolCfg.h \ ../../include/U2Lang/SchemaActorsRegistry.h \ ../../corelibs/U2Lang/src/model/SchemaActorsRegistry.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ src/u_build/HMMBuildDialogController.h \ _tmp/ui/ui_HMMBuildDialog.h \ src/u_build/uhmmbuild.h \ src/u_build/HMMBuildWorker.h \ ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ src/u_calibrate/uhmmcalibrate.h \ src/HMMIOWorker.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ src/hmmer2/structs.h \ src/hmmer2/config.h \ src/u_calibrate/HMMCalibrateTask.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMBuildWorker.o src/u_build/HMMBuildWorker.cpp _tmp/obj/release/uhmmbuild.o: src/u_build/uhmmbuild.cpp src/u_build/uhmmbuild.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmbuild.o src/u_build/uhmmbuild.cpp _tmp/obj/release/HMMCalibrateDialogController.o: src/u_calibrate/HMMCalibrateDialogController.cpp ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/AppResources.h \ ../../corelibs/U2Core/src/globals/AppResources.h \ ../../include/U2Core/global.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Gui/HelpButton.h \ ../../corelibs/U2Gui/src/util/HelpButton.h \ ../../include/U2Gui/LastUsedDirHelper.h \ ../../corelibs/U2Gui/src/util/LastUsedDirHelper.h \ ../../include/U2Gui/SaveDocumentController.h \ ../../corelibs/U2Gui/src/util/SaveDocumentController.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Gui/U2FileDialog.h \ ../../corelibs/U2Gui/src/util/U2FileDialog.h \ src/u_calibrate/HMMCalibrateDialogController.h \ src/u_calibrate/uhmmcalibrate.h \ _tmp/ui/ui_HMMCalibrateDialog.h \ src/u_calibrate/HMMCalibrateTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMCalibrateDialogController.o src/u_calibrate/HMMCalibrateDialogController.cpp _tmp/obj/release/HMMCalibrateTask.o: src/u_calibrate/HMMCalibrateTask.cpp src/u_calibrate/HMMCalibrateTask.h \ src/u_calibrate/uhmmcalibrate.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ src/TaskLocalStorage.h \ ../../include/U2Core/Counter.h \ ../../corelibs/U2Core/src/globals/Counter.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMCalibrateTask.o src/u_calibrate/HMMCalibrateTask.cpp _tmp/obj/release/uhmmcalibrate.o: src/u_calibrate/uhmmcalibrate.cpp src/u_calibrate/uhmmcalibrate.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmcalibrate.o src/u_calibrate/uhmmcalibrate.cpp _tmp/obj/release/hmmer_ppu.o: src/u_search/hmmer_ppu.cpp src/hmmer2/structs.h \ src/hmmer2/config.h \ src/u_search/hmmer_ppu.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/hmmer_ppu.o src/u_search/hmmer_ppu.cpp _tmp/obj/release/HMMSearchDialogController.o: src/u_search/HMMSearchDialogController.cpp ../../include/U2Core/AnnotationTableObject.h \ ../../corelibs/U2Core/src/gobjects/AnnotationTableObject.h \ ../../include/U2Core/Annotation.h \ ../../corelibs/U2Core/src/datatype/Annotation.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/AnnotationGroup.h \ ../../corelibs/U2Core/src/datatype/AnnotationGroup.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Core/AppResources.h \ ../../corelibs/U2Core/src/globals/AppResources.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/CreateAnnotationTask.h \ ../../corelibs/U2Core/src/tasks/CreateAnnotationTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/GObjectUtils.h \ ../../corelibs/U2Core/src/gobjects/GObjectUtils.h \ ../../include/U2Core/GObjectTypes.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/L10n.h \ ../../corelibs/U2Core/src/globals/L10n.h \ ../../include/U2Core/U1AnnotationUtils.h \ ../../corelibs/U2Core/src/util/U1AnnotationUtils.h \ ../../include/U2Core/U2OpStatusUtils.h \ ../../corelibs/U2Core/src/util/U2OpStatusUtils.h \ ../../include/U2Gui/CreateAnnotationWidgetController.h \ ../../corelibs/U2Gui/src/util/CreateAnnotationWidgetController.h \ ../../include/U2Core/AnnotationCreationPattern.h \ ../../corelibs/U2Core/src/util/AnnotationCreationPattern.h \ ../../include/U2Core/GObjectReference.h \ ../../include/U2Gui/HelpButton.h \ ../../corelibs/U2Gui/src/util/HelpButton.h \ ../../include/U2Gui/LastUsedDirHelper.h \ ../../corelibs/U2Gui/src/util/LastUsedDirHelper.h \ ../../include/U2Gui/U2FileDialog.h \ ../../corelibs/U2Gui/src/util/U2FileDialog.h \ ../../include/U2View/ADVSequenceObjectContext.h \ ../../corelibs/U2View/src/ov_sequence/ADVSequenceObjectContext.h \ ../../corelibs/U2View/src/ov_sequence/SequenceObjectContext.h \ ../../include/U2View/AnnotatedDNAView.h \ ../../corelibs/U2View/src/ov_sequence/AnnotatedDNAView.h \ ../../include/U2Gui/ObjectViewModel.h \ ../../corelibs/U2Gui/src/ObjectViewModel.h \ ../../include/U2Core/SelectionModel.h \ ../../corelibs/U2Core/src/selection/SelectionModel.h \ ../../corelibs/U2Gui/src/MainWindow.h \ ../../include/U2Core/PluginModel.h \ ../../corelibs/U2Core/src/globals/PluginModel.h \ ../../include/U2Core/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceTypes.h \ ../../corelibs/U2Core/src/globals/ServiceModel.h \ ../../corelibs/U2Gui/src/NotificationsTypes.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ src/u_search/HMMSearchDialogController.h \ src/u_search/uhmmsearch.h \ _tmp/ui/ui_HMMSearchDialog.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ src/u_search/HMMSearchTask.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ src/TaskLocalStorage.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMSearchDialogController.o src/u_search/HMMSearchDialogController.cpp _tmp/obj/release/HMMSearchTask.o: src/u_search/HMMSearchTask.cpp src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Counter.h \ ../../corelibs/U2Core/src/globals/Counter.h \ ../../include/U2Core/global.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/DNATranslation.h \ ../../corelibs/U2Core/src/datatype/DNATranslation.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/HMMIO.h \ src/u_search/HMMSearchTask.h \ src/u_search/uhmmsearch.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ src/TaskLocalStorage.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMSearchTask.o src/u_search/HMMSearchTask.cpp _tmp/obj/release/HMMSearchWorker.o: src/u_search/HMMSearchWorker.cpp ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/DNATranslation.h \ ../../corelibs/U2Core/src/datatype/DNATranslation.h \ ../../include/U2Core/FailTask.h \ ../../corelibs/U2Core/src/tasks/FailTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/MultiTask.h \ ../../corelibs/U2Core/src/tasks/MultiTask.h \ ../../include/U2Core/TaskSignalMapper.h \ ../../corelibs/U2Core/src/tasks/TaskSignalMapper.h \ ../../include/U2Core/U2OpStatusUtils.h \ ../../corelibs/U2Core/src/util/U2OpStatusUtils.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Designer/DelegateEditors.h \ ../../corelibs/U2Designer/src/DelegateEditors.h \ ../../include/U2Designer/URLLineEdit.h \ ../../corelibs/U2Designer/src/support/URLLineEdit.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Designer/src/PropertyWidget.h \ ../../include/U2Lang/ActorPrototypeRegistry.h \ ../../corelibs/U2Lang/src/model/ActorPrototypeRegistry.h \ ../../include/U2Lang/ActorModel.h \ ../../corelibs/U2Lang/src/model/actor/Actor.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/Peer.h \ ../../corelibs/U2Lang/src/model/Peer.h \ ../../include/U2Lang/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/PortMapping.h \ ../../corelibs/U2Lang/src/model/wizard/SlotMapping.h \ ../../corelibs/U2Lang/src/model/wizard/IdMapping.h \ ../../corelibs/U2Lang/src/model/actor/ActorConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/actor/ActorDocument.h \ ../../include/U2Lang/Actor.h \ ../../corelibs/U2Lang/src/model/actor/ActorPrototype.h \ ../../include/U2Lang/Port.h \ ../../corelibs/U2Lang/src/model/Port.h \ ../../corelibs/U2Lang/src/model/actor/ActorValidator.h \ ../../include/U2Lang/ConfigurationValidator.h \ ../../include/U2Lang/BaseActorCategories.h \ ../../corelibs/U2Lang/src/library/BaseActorCategories.h \ ../../include/U2Lang/BasePorts.h \ ../../corelibs/U2Lang/src/library/BasePorts.h \ ../../include/U2Lang/BaseSlots.h \ ../../corelibs/U2Lang/src/library/BaseSlots.h \ ../../include/U2Lang/BaseTypes.h \ ../../corelibs/U2Lang/src/library/BaseTypes.h \ ../../include/U2Lang/CoreLibConstants.h \ ../../corelibs/U2Lang/src/support/CoreLibConstants.h \ ../../include/U2Lang/IntegralBusModel.h \ ../../corelibs/U2Lang/src/model/IntegralBusModel.h \ ../../include/U2Lang/WorkflowEnv.h \ ../../corelibs/U2Lang/src/model/WorkflowEnv.h \ ../../include/U2Lang/ExternalToolCfg.h \ ../../corelibs/U2Lang/src/model/ExternalToolCfg.h \ ../../include/U2Lang/SchemaActorsRegistry.h \ ../../corelibs/U2Lang/src/model/SchemaActorsRegistry.h \ ../../include/U2Lang/Schema.h \ ../../corelibs/U2Lang/src/model/Schema.h \ ../../include/U2Lang/Aliasing.h \ ../../corelibs/U2Lang/src/model/Aliasing.h \ src/u_search/HMMSearchWorker.h \ ../../include/U2Lang/LocalDomain.h \ ../../corelibs/U2Lang/src/library/LocalDomain.h \ ../../include/U2Core/ExternalToolRunTask.h \ ../../corelibs/U2Core/src/tasks/ExternalToolRunTask.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Lang/IntegralBus.h \ ../../corelibs/U2Lang/src/model/IntegralBus.h \ ../../include/U2Lang/WorkflowTransport.h \ ../../corelibs/U2Lang/src/model/WorkflowTransport.h \ ../../include/U2Lang/WorkflowManager.h \ ../../corelibs/U2Lang/src/model/WorkflowManager.h \ ../../include/U2Lang/WorkflowUtils.h \ ../../corelibs/U2Lang/src/support/WorkflowUtils.h \ ../../include/U2Lang/Dataset.h \ ../../corelibs/U2Lang/src/model/url_attribute/Dataset.h \ ../../include/U2Core/FilesIterator.h \ ../../corelibs/U2Core/src/util/FilesIterator.h \ ../../include/U2Lang/SupportStructures.h \ ../../corelibs/U2Lang/src/support/SupportStructures.h \ src/u_search/uhmmsearch.h \ src/HMMIOWorker.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ src/hmmer2/structs.h \ src/hmmer2/config.h \ src/u_search/HMMSearchTask.h \ src/HMMIO.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ src/hmmer2/funcs.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMSearchWorker.o src/u_search/HMMSearchWorker.cpp _tmp/obj/release/HMMSearchQDActor.o: src/u_search/HMMSearchQDActor.cpp ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/FailTask.h \ ../../corelibs/U2Core/src/tasks/FailTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/TaskSignalMapper.h \ ../../corelibs/U2Core/src/tasks/TaskSignalMapper.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Designer/DelegateEditors.h \ ../../corelibs/U2Designer/src/DelegateEditors.h \ ../../include/U2Designer/URLLineEdit.h \ ../../corelibs/U2Designer/src/support/URLLineEdit.h \ ../../include/U2Lang/ConfigurationEditor.h \ ../../corelibs/U2Lang/src/model/ConfigurationEditor.h \ ../../include/U2Lang/Attribute.h \ ../../corelibs/U2Lang/src/model/Attribute.h \ ../../include/U2Core/ScriptTask.h \ ../../corelibs/U2Core/src/tasks/ScriptTask.h \ ../../include/U2Lang/AttributeRelation.h \ ../../corelibs/U2Lang/src/model/AttributeRelation.h \ ../../include/U2Lang/Datatype.h \ ../../corelibs/U2Lang/src/model/Datatype.h \ ../../include/U2Lang/Descriptor.h \ ../../corelibs/U2Lang/src/model/Descriptor.h \ ../../include/U2Core/IdRegistry.h \ ../../corelibs/U2Core/src/globals/IdRegistry.h \ ../../include/U2Lang/ScriptLibrary.h \ ../../corelibs/U2Lang/src/library/script/ScriptLibrary.h \ ../../include/U2Lang/DbiDataHandler.h \ ../../corelibs/U2Lang/src/model/DbiDataHandler.h \ ../../include/U2Core/U2ObjectDbi.h \ ../../corelibs/U2Core/src/dbi/U2ObjectDbi.h \ ../../include/U2Core/U2Dbi.h \ ../../corelibs/U2Core/src/dbi/U2Dbi.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Assembly.h \ ../../corelibs/U2Core/src/datatype/U2Assembly.h \ ../../include/U2Core/U2Sequence.h \ ../../corelibs/U2Core/src/datatype/U2Sequence.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../include/U2Core/U2Range.h \ ../../corelibs/U2Core/src/datatype/U2Range.h \ ../../include/U2Core/U2Attribute.h \ ../../corelibs/U2Core/src/datatype/U2Attribute.h \ ../../include/U2Core/U2Mod.h \ ../../corelibs/U2Core/src/datatype/U2Mod.h \ ../../include/U2Core/DbiConnection.h \ ../../corelibs/U2Core/src/dbi/DbiConnection.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Lang/SupportClass.h \ ../../corelibs/U2Lang/src/support/SupportClass.h \ ../../include/U2Lang/WorkflowContext.h \ ../../corelibs/U2Lang/src/model/WorkflowContext.h \ ../../include/U2Core/AppFileStorage.h \ ../../corelibs/U2Core/src/globals/AppFileStorage.h \ ../../corelibs/U2Core/src/dbi/U2SQLiteTripleStore.h \ ../../include/U2Lang/DbiDataStorage.h \ ../../corelibs/U2Lang/src/model/DbiDataStorage.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/AssemblyObject.h \ ../../corelibs/U2Core/src/gobjects/AssemblyObject.h \ ../../include/U2Core/GObjectTypes.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/MultipleSequenceAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleSequenceAlignmentObject.h \ ../../include/U2Core/MultipleAlignmentObject.h \ ../../corelibs/U2Core/src/gobjects/MultipleAlignmentObject.h \ ../../include/U2Core/MaModificationInfo.h \ ../../corelibs/U2Core/src/util/MaModificationInfo.h \ ../../include/U2Core/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ ../../include/U2Core/U2DbiUtils.h \ ../../corelibs/U2Core/src/dbi/U2DbiUtils.h \ ../../include/U2Core/StrPackUtils.h \ ../../corelibs/U2Core/src/util/StrPackUtils.h \ ../../include/U2Core/U2DbiRegistry.h \ ../../corelibs/U2Core/src/dbi/U2DbiRegistry.h \ ../../include/U2Core/VariantTrackObject.h \ ../../corelibs/U2Core/src/gobjects/VariantTrackObject.h \ ../../include/U2Core/U2Variant.h \ ../../corelibs/U2Core/src/datatype/U2Variant.h \ ../../include/U2Lang/MessageMetadata.h \ ../../corelibs/U2Lang/src/model/MessageMetadata.h \ ../../include/U2Lang/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/WorkflowScriptEngine.h \ ../../corelibs/U2Lang/src/model/PortRelation.h \ ../../include/U2Lang/SchemaConfig.h \ ../../corelibs/U2Lang/src/model/SchemaConfig.h \ ../../include/U2Lang/AttributeInfo.h \ ../../corelibs/U2Lang/src/support/AttributeInfo.h \ ../../include/U2Lang/RunFileSystem.h \ ../../corelibs/U2Lang/src/model/RunFileSystem.h \ ../../corelibs/U2Designer/src/PropertyWidget.h \ ../../include/U2Gui/DialogUtils.h \ ../../corelibs/U2Gui/src/util/DialogUtils.h \ ../../include/U2Lang/BaseTypes.h \ ../../corelibs/U2Lang/src/library/BaseTypes.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ src/u_search/HMMSearchQDActor.h \ ../../include/U2Lang/QDScheme.h \ ../../corelibs/U2Lang/src/model/QDScheme.h \ ../../include/U2Lang/Configuration.h \ ../../corelibs/U2Lang/src/model/Configuration.h \ ../../corelibs/U2Lang/src/model/ConfigurationValidator.h \ ../../include/U2Lang/QueryDesignerRegistry.h \ ../../corelibs/U2Lang/src/model/QueryDesignerRegistry.h \ src/u_search/HMMSearchTask.h \ src/u_search/uhmmsearch.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/HMMSearchQDActor.o src/u_search/HMMSearchQDActor.cpp _tmp/obj/release/uhmmsearch.o: src/u_search/uhmmsearch.cpp src/u_search/uhmmsearch.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h \ src/u_search/hmmer_ppu.h \ src/u_search/uhmmsearch_cell.h \ src/u_search/uhmmsearch_opt.h \ src/u_search/uhmmsearch_sse.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmsearch.o src/u_search/uhmmsearch.cpp _tmp/obj/release/uhmmsearch_cell.o: src/u_search/uhmmsearch_cell.cpp src/u_search/hmmer_ppu.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/u_search/uhmmsearch.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmsearch_cell.o src/u_search/uhmmsearch_cell.cpp _tmp/obj/release/uhmmsearch_opt.o: src/u_search/uhmmsearch_opt.cpp src/u_search/uhmmsearch_opt.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/u_search/uhmmsearch.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ src/hmmer2/funcs.h \ src/HMMIO.h \ ../../include/U2Core/DNAAlphabet.h \ ../../corelibs/U2Core/src/datatype/DNAAlphabet.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmsearch_opt.o src/u_search/uhmmsearch_opt.cpp _tmp/obj/release/uhmmsearch_sse.o: src/u_search/uhmmsearch_sse.cpp src/u_search/uhmmsearch_opt.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ ../../include/U2Core/SequenceWalkerTask.h \ ../../corelibs/U2Core/src/tasks/SequenceWalkerTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/Timer.h \ ../../corelibs/U2Core/src/globals/Timer.h \ ../../include/U2Core/Counter.h \ ../../corelibs/U2Core/src/globals/Counter.h \ src/hmmer2/funcs.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmsearch_sse.o src/u_search/uhmmsearch_sse.cpp _tmp/obj/release/hmmer_spu.o: src/u_spu/hmmer_spu.c src/u_spu/hmmer_spu.h $(CC) -c $(CFLAGS) $(INCPATH) -o _tmp/obj/release/hmmer_spu.o src/u_spu/hmmer_spu.c _tmp/obj/release/hmmercell_spu.o: src/u_spu/hmmercell_spu.c src/u_spu/hmmer_spu.h $(CC) -c $(CFLAGS) $(INCPATH) -o _tmp/obj/release/hmmercell_spu.o src/u_spu/hmmercell_spu.c _tmp/obj/release/uhmmerTests.o: src/u_tests/uhmmerTests.cpp ../../include/U2Core/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNASequence.h \ ../../corelibs/U2Core/src/datatype/DNAInfo.h \ ../../include/U2Core/global.h \ ../../corelibs/U2Core/src/globals/global.h \ ../../include/U2Core/U2IdTypes.h \ ../../corelibs/U2Core/src/datatype/U2IdTypes.h \ ../../include/U2Core/U2Identity.h \ ../../corelibs/U2Core/src/datatype/U2Identity.h \ ../../corelibs/U2Core/src/datatype/DNAQuality.h \ ../../include/U2Core/TextUtils.h \ ../../corelibs/U2Core/src/util/TextUtils.h \ ../../include/U2Core/AppContext.h \ ../../corelibs/U2Core/src/globals/AppContext.h \ ../../include/U2Core/IOAdapter.h \ ../../corelibs/U2Core/src/io/IOAdapter.h \ ../../include/U2Core/GUrl.h \ ../../corelibs/U2Core/src/globals/GUrl.h \ ../../include/U2Core/IOAdapterUtils.h \ ../../corelibs/U2Core/src/util/IOAdapterUtils.h \ ../../include/U2Core/DocumentModel.h \ ../../corelibs/U2Core/src/models/DocumentModel.h \ ../../include/U2Core/UnloadedObject.h \ ../../corelibs/U2Core/src/gobjects/UnloadedObject.h \ ../../include/U2Core/GObject.h \ ../../corelibs/U2Core/src/models/GObject.h \ ../../corelibs/U2Core/src/models/StateLockableDataModel.h \ ../../corelibs/U2Core/src/models/GObjectReference.h \ ../../include/U2Core/GObjectRelationRoles.h \ ../../corelibs/U2Core/src/gobjects/GObjectRelationRoles.h \ ../../include/U2Core/U2Type.h \ ../../corelibs/U2Core/src/datatype/U2Type.h \ ../../corelibs/U2Core/src/gobjects/GObjectTypes.h \ ../../include/U2Core/U2FormatCheckResult.h \ ../../corelibs/U2Core/src/dbi/U2FormatCheckResult.h \ ../../include/U2Core/BaseDocumentFormats.h \ ../../corelibs/U2Core/src/globals/BaseDocumentFormats.h \ ../../include/U2Core/U2SafePoints.h \ ../../corelibs/U2Core/src/globals/U2SafePoints.h \ ../../include/U2Core/Log.h \ ../../corelibs/U2Core/src/globals/Log.h \ ../../include/U2Core/SaveDocumentTask.h \ ../../corelibs/U2Core/src/tasks/SaveDocumentTask.h \ ../../include/U2Core/Task.h \ ../../corelibs/U2Core/src/globals/Task.h \ ../../include/U2Core/U2OpStatus.h \ ../../corelibs/U2Core/src/globals/U2OpStatus.h \ ../../include/U2Core/GObjectTypes.h \ ../../include/U2Core/AnnotationTableObject.h \ ../../corelibs/U2Core/src/gobjects/AnnotationTableObject.h \ ../../include/U2Core/Annotation.h \ ../../corelibs/U2Core/src/datatype/Annotation.h \ ../../include/U2Core/AnnotationData.h \ ../../corelibs/U2Core/src/datatype/AnnotationData.h \ ../../include/U2Core/U2FeatureType.h \ ../../corelibs/U2Core/src/datatype/U2FeatureType.h \ ../../include/U2Core/U2Location.h \ ../../corelibs/U2Core/src/datatype/U2Location.h \ ../../include/U2Core/U2Region.h \ ../../corelibs/U2Core/src/datatype/U2Region.h \ ../../include/U2Core/U2Qualifier.h \ ../../corelibs/U2Core/src/datatype/U2Qualifier.h \ ../../include/U2Core/AnnotationGroup.h \ ../../corelibs/U2Core/src/datatype/AnnotationGroup.h \ ../../include/U2Core/U2Feature.h \ ../../corelibs/U2Core/src/datatype/U2Feature.h \ ../../include/U2Core/DNASequenceObject.h \ ../../corelibs/U2Core/src/gobjects/DNASequenceObject.h \ ../../include/U2Core/TextObject.h \ ../../corelibs/U2Core/src/gobjects/TextObject.h \ ../../include/U2Core/U2RawData.h \ ../../corelibs/U2Core/src/datatype/U2RawData.h \ ../../include/U2Core/UdrRecord.h \ ../../corelibs/U2Core/src/datatype/UdrRecord.h \ ../../include/U2Core/UdrSchema.h \ ../../corelibs/U2Core/src/datatype/UdrSchema.h \ ../../include/U2Test/GTestFrameworkComponents.h \ ../../corelibs/U2Test/src/GTestFrameworkComponents.h \ ../../corelibs/U2Test/src/GTest.h \ src/u_tests/uhmmerTests.h \ ../../include/U2Test/XMLTestUtils.h \ ../../corelibs/U2Test/src/xmltest/XMLTestUtils.h \ ../../include/U2Test/GTest.h \ ../../corelibs/U2Test/src/xmltest/XMLTestFormat.h \ src/hmmer2/funcs.h \ src/hmmer2/config.h \ src/hmmer2/structs.h \ src/u_build/HMMBuildDialogController.h \ _tmp/ui/ui_HMMBuildDialog.h \ ../../include/U2Core/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignment.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleAlignmentRow.h \ ../../include/U2Core/MsaRowUtils.h \ ../../corelibs/U2Core/src/util/MsaRowUtils.h \ ../../include/U2Core/U2Msa.h \ ../../corelibs/U2Core/src/datatype/U2Msa.h \ ../../include/U2Core/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/U2Alphabet.h \ ../../corelibs/U2Core/src/datatype/msa/MultipleSequenceAlignmentRow.h \ src/u_build/uhmmbuild.h \ src/u_calibrate/HMMCalibrateTask.h \ src/u_calibrate/uhmmcalibrate.h \ src/u_search/HMMSearchDialogController.h \ src/u_search/uhmmsearch.h \ _tmp/ui/ui_HMMSearchDialog.h $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/uhmmerTests.o src/u_tests/uhmmerTests.cpp _tmp/obj/release/qrc_hmm2.o: _tmp/rcc/qrc_hmm2.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/qrc_hmm2.o _tmp/rcc/qrc_hmm2.cpp _tmp/obj/release/moc_HMMIO.o: _tmp/moc/release/moc_HMMIO.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMIO.o _tmp/moc/release/moc_HMMIO.cpp _tmp/obj/release/moc_HMMIOWorker.o: _tmp/moc/release/moc_HMMIOWorker.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMIOWorker.o _tmp/moc/release/moc_HMMIOWorker.cpp _tmp/obj/release/moc_uHMMPlugin.o: _tmp/moc/release/moc_uHMMPlugin.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_uHMMPlugin.o _tmp/moc/release/moc_uHMMPlugin.cpp _tmp/obj/release/moc_HMMBuildDialogController.o: _tmp/moc/release/moc_HMMBuildDialogController.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMBuildDialogController.o _tmp/moc/release/moc_HMMBuildDialogController.cpp _tmp/obj/release/moc_HMMBuildWorker.o: _tmp/moc/release/moc_HMMBuildWorker.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMBuildWorker.o _tmp/moc/release/moc_HMMBuildWorker.cpp _tmp/obj/release/moc_uhmmbuild.o: _tmp/moc/release/moc_uhmmbuild.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_uhmmbuild.o _tmp/moc/release/moc_uhmmbuild.cpp _tmp/obj/release/moc_HMMCalibrateDialogController.o: _tmp/moc/release/moc_HMMCalibrateDialogController.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMCalibrateDialogController.o _tmp/moc/release/moc_HMMCalibrateDialogController.cpp _tmp/obj/release/moc_HMMCalibrateTask.o: _tmp/moc/release/moc_HMMCalibrateTask.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMCalibrateTask.o _tmp/moc/release/moc_HMMCalibrateTask.cpp _tmp/obj/release/moc_HMMSearchDialogController.o: _tmp/moc/release/moc_HMMSearchDialogController.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMSearchDialogController.o _tmp/moc/release/moc_HMMSearchDialogController.cpp _tmp/obj/release/moc_HMMSearchTask.o: _tmp/moc/release/moc_HMMSearchTask.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMSearchTask.o _tmp/moc/release/moc_HMMSearchTask.cpp _tmp/obj/release/moc_HMMSearchWorker.o: _tmp/moc/release/moc_HMMSearchWorker.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMSearchWorker.o _tmp/moc/release/moc_HMMSearchWorker.cpp _tmp/obj/release/moc_HMMSearchQDActor.o: _tmp/moc/release/moc_HMMSearchQDActor.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_HMMSearchQDActor.o _tmp/moc/release/moc_HMMSearchQDActor.cpp _tmp/obj/release/moc_uhmmsearch.o: _tmp/moc/release/moc_uhmmsearch.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_uhmmsearch.o _tmp/moc/release/moc_uhmmsearch.cpp _tmp/obj/release/moc_uhmmerTests.o: _tmp/moc/release/moc_uhmmerTests.cpp $(CXX) -c $(CXXFLAGS) $(INCPATH) -o _tmp/obj/release/moc_uhmmerTests.o _tmp/moc/release/moc_uhmmerTests.cpp ####### Install install_target: first FORCE @test -d $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins || mkdir -p $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins -$(INSTALL_PROGRAM) ../../_release/plugins/$(TARGET) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET) -$(STRIP) --strip-unneeded $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET) -$(SYMLINK) $(TARGET) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET0) -$(SYMLINK) $(TARGET) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET1) -$(SYMLINK) $(TARGET) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET2) uninstall_target: FORCE -$(DEL_FILE) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET) -$(DEL_FILE) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET0) -$(DEL_FILE) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET1) -$(DEL_FILE) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/$(TARGET2) -$(DEL_DIR) $(INSTALL_ROOT)/home/birch/BIRCH/local/pkg/ugene-1.29.0/lib/ugene/plugins/ install: install_target FORCE uninstall: uninstall_target FORCE FORCE: