S1	E1	S2	E2	Reference	Contig	IDY	Ambiguous	Best_group
1	1120	1	1120	gi_49175990_ref_NC_000913.2_	contig1	100.0		True
CONTIG	contig1	1120	correct
1681	3290	1	1610	gi_49175990_ref_NC_000913.2_	contig2	100.0		True
CONTIG	contig2	1610	correct
4621	6650	1	2030	gi_49175990_ref_NC_000913.2_	contig3	100.0		True
relocation, inconsistency = 1400
8051	10000	2031	3980	gi_49175990_ref_NC_000913.2_	contig3	100.0		True
CONTIG	contig3	3980	misassembled