************************************* Invoked: Fri Jan 13 16:05:33 2017 [0] Arguments: /tmp/ugeneInstaller [1] Operations sanity check succeeded. [6889] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.clustalo/license_en.txt". Using untranslated fallback. [6889] addDownloadable "tools.7z" [6889] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.vcftools/license_en.txt". Using untranslated fallback. [6889] addDownloadable "tools.7z" [6889] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.perl/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/ugene/license_en.txt". Using untranslated fallback. [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.clustalw/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.samtools/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.mrbayes/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.hmmer/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/NGS.RScript/license_en.txt". Using untranslated fallback. [6890] addDownloadable "tools.7z" [6890] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.snpEff/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.mafft/license_en.txt". Using untranslated fallback. [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.mafft/license_en.extensions.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.cufflinks/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] addDownloadable "imageformats.7z" [6891] addDownloadable "man1.7z" [6891] addDownloadable "platforms.7z" [6891] addDownloadable "plugins.7z" [6891] addDownloadable "sqldrivers.7z" [6891] addDownloadable "content.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.fastqc/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.tcoffee/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.tophat/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6891] addDownloadable "data.7z" [6891] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.bowtie/license_en.txt". Using untranslated fallback. [6891] addDownloadable "tools.7z" [6892] addDownloadable "tools.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.bwa/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.bedtools2/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.bowtie2/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.python/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.bedGraphToBigWig/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] addDownloadable "data.7z" [6892] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.CAP3/license_en.txt". Using untranslated fallback. [6892] addDownloadable "tools.7z" [6892] addDownloadable "tools.7z" [6893] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.phyml/license_en.txt". Using untranslated fallback. [6893] addDownloadable "tools.7z" [6893] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.SPAdes/license_en.txt". Using untranslated fallback. [6893] addDownloadable "tools.7z" [6893] Unable to open translated license file"/tmp/remoterepo-Q3WWcY/full.tools.cutadapt/license_en.txt". Using untranslated fallback. [6893] addDownloadable "tools.7z" [6897] OS: unknown [6897] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6897] CPU Architecture: x86_64 [6902] OS: unknown [6902] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6904] OS: unknown [6904] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6904] CPU Architecture: x86_64 [6906] CPU Architecture: x86_64 [6908] CPU Architecture: x86_64 [6912] OS: unknown [6912] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6912] CPU Architecture: x86_64 [6915] OS: unknown [6915] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6915] CPU Architecture: x86_64 [6918] OS: unknown [6918] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6918] CPU Architecture: x86_64 [6922] OS: unknown [6922] Kernel: linux/2.6.32-642.11.1.el6.x86_64 [6922] CPU Architecture: x86_64 [44211] Tmp is on a different volume than the install folder. Tmp volume mount point: "/" Free space available: "40.38 GiB" Install volume mount point: "/home" Free space available: "1.42 TiB" [44211] Installation space required: "242.24 MiB" Temporary space required: "91.93 MiB" Local repository size: "0.00 bytes" [45531] backup operation: Mkdir [45531] - arguments: /home/birch/BIRCH/local/pkg/ugene [45531] Done [45531] perform operation: Mkdir [45531] - arguments: /home/birch/BIRCH/local/pkg/ugene [45531] Done [45531] Install size: 3 components [96295] backup ugene operation: License [96295] - arguments: [96295] Done [96295] perform ugene operation: License [96296] - arguments: [96296] Done [96297] backup ugene.ugene operation: Extract [96297] - arguments: installer://ugene.ugene/1.25.0content.7z, /home/birch/BIRCH/local/pkg/ugene [96297] Done [96297] perform ugene.ugene operation: Extract [96297] - arguments: installer://ugene.ugene/1.25.0content.7z, /home/birch/BIRCH/local/pkg/ugene [99104] Done [99104] backup ugene.ugene operation: Extract [99104] - arguments: installer://ugene.ugene/1.25.0imageformats.7z, /home/birch/BIRCH/local/pkg/ugene [99104] Done [99104] perform ugene.ugene operation: Extract [99104] - arguments: installer://ugene.ugene/1.25.0imageformats.7z, /home/birch/BIRCH/local/pkg/ugene [99159] Done [99159] backup ugene.ugene operation: Extract [99159] - arguments: installer://ugene.ugene/1.25.0man1.7z, /home/birch/BIRCH/local/pkg/ugene [99159] Done [99159] perform ugene.ugene operation: Extract [99159] - arguments: installer://ugene.ugene/1.25.0man1.7z, /home/birch/BIRCH/local/pkg/ugene [99177] Done [99177] backup ugene.ugene operation: Extract [99177] - arguments: installer://ugene.ugene/1.25.0platforms.7z, /home/birch/BIRCH/local/pkg/ugene [99177] Done [99177] perform ugene.ugene operation: Extract [99177] - arguments: installer://ugene.ugene/1.25.0platforms.7z, /home/birch/BIRCH/local/pkg/ugene [99229] Done [99229] backup ugene.ugene operation: Extract [99229] - arguments: installer://ugene.ugene/1.25.0plugins.7z, /home/birch/BIRCH/local/pkg/ugene [99229] Done [99229] perform ugene.ugene operation: Extract [99229] - arguments: installer://ugene.ugene/1.25.0plugins.7z, /home/birch/BIRCH/local/pkg/ugene [99806] Done [99806] backup ugene.ugene operation: Extract [99806] - arguments: installer://ugene.ugene/1.25.0sqldrivers.7z, /home/birch/BIRCH/local/pkg/ugene [99806] Done [99806] perform ugene.ugene operation: Extract [99806] - arguments: installer://ugene.ugene/1.25.0sqldrivers.7z, /home/birch/BIRCH/local/pkg/ugene [99809] Done [99810] backup ugene.data operation: Extract [99810] - arguments: installer://ugene.data/1.25.0data.7z, /home/birch/BIRCH/local/pkg/ugene [99810] Done [99810] perform ugene.data operation: Extract [99810] - arguments: installer://ugene.data/1.25.0data.7z, /home/birch/BIRCH/local/pkg/ugene [103149] Done [103157] Writing maintenance tool: "/home/birch/BIRCH/local/pkg/ugene/setup.new" [103230] Wrote permissions for maintenance tool. [103316] Maintenance tool restart: false. [103317] SHOW FINISHED PAGE [107000] starting "/home/birch/BIRCH/local/pkg/ugene/ugene" ("-ui")