AFLPgui
Class AnalysisView

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--java.awt.Panel
                    |
                    +--AFLPgui.AnalysisView

All Implemented Interfaces:

javax.accessibility.Accessible, java.util.EventListener, java.awt.image.ImageObserver, java.awt.event.ItemListener, java.awt.MenuContainer, java.io.Serializable

public class AnalysisView

extends java.awt.Panel

implements java.awt.event.ItemListener

This class is responsible for displaying methods to analyze a gel and the results of the analysis. The analysis output is text, so it is simply displayed in a text area. A choice box is provided to switch between the different analysis methods. In addition to the main panel, which contains the TextArea, this class has a ButtonBar with controls and a Bar to display its status. These should be displayed by whichever object is displaying this. Also, this class expects to be contained by a ScrollPane. (To change this, modify the paint method.)

See Also:

Serialized Form

Inner classes inherited from class java.awt.Panel

java.awt.Panel.AccessibleAWTPanel

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

AnalysisView(java.awt.Frame parentWin)
Create a new analysis view with the specified parent window.

Method Summary

ButtonBar	getButtonBar() Gives the button bar used by this class.
Bar	getInfoBar() Gives the label that this class uses to provide status information.
java.lang.String	getText() Gives the text currently displayed in the output text area.
void	init(Gel gel) This runs whatever analysis operation is selected, or the default if none has been choosen yet.
void	itemStateChanged(java.awt.event.ItemEvent e) Called to handle item events.
void	paint(java.awt.Graphics g) This is used to resize the text area.

Methods inherited from class java.awt.Panel

addNotify, getAccessibleContext

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getInsets, getLayout, getListeners, getMaximumSize, getMinimumSize, getPreferredSize, insets, invalidate, isAncestorOf, layout, list, list, locate, minimumSize, paintComponents, paramString, preferredSize, print, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, removeNotify, setFont, setLayout, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addPropertyChangeListener, addPropertyChangeListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, getBackground, getBounds, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont, getFontMetrics, getForeground, getGraphics, getGraphicsConfiguration, getHeight, getInputContext, getInputMethodRequests, getLocale, getLocation, getLocation, getLocationOnScreen, getName, getParent, getPeer, getSize, getSize, getToolkit, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isDisplayable, isDoubleBuffered, isEnabled, isFocusTraversable, isLightweight, isOpaque, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, reshape, resize, resize, setBackground, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setEnabled, setForeground, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AnalysisView

public AnalysisView(java.awt.Frame parentWin)

Create a new analysis view with the specified parent window. The parent window is used as a parameter for dialog box.

Parameters:

parentWin - the window that contains this class

Method Detail

init

public void init(Gel gel)

This runs whatever analysis operation is selected, or the default if none has been choosen yet. The output from that method is then displayed in a text area.

Parameters:

gel - the gel to analyze

getText

public java.lang.String getText()

Gives the text currently displayed in the output text area.

Returns:

the text

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent e)

Called to handle item events. It watches for the selection box for the analysis method to change, and when it does, it re-runs the analysis.

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

paint

public void paint(java.awt.Graphics g)

This is used to resize the text area. Note: it assumes that the text area is contained by a ScrollPane. The size is set so that it mostly fills the display area. No actually drawing is handled here. Instead, the super is called.

Overrides:

paint in class java.awt.Container

Parameters:

g - the graphics object that represents the drawable area of this component.

See Also:

ScrollPane

getButtonBar

public ButtonBar getButtonBar()

Gives the button bar used by this class.

Returns:

a button bar with components specific to this class, as wells as the standard new, open, save, and print buttons.

getInfoBar

public Bar getInfoBar()

Gives the label that this class uses to provide status information.

Returns:

a bar containing the label described above.